RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 PCDHB6Q9Y5E3 794 aa7.15□□□□□ -1.26
VPS29-212ENST00000621131 FKBP9O95302 570 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 PEX11BO96011 259 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 MAN2A2P49641 1150 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 SLC25A3Q00325 362 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 OCRLQ01968 901 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 SART3Q15020 963 aaKnown RBP7.14□□□□□ -1.27
VPS29-212ENST00000621131 C1QL3Q5VWW1 255 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 MFSD5Q6N075 450 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 HTR3DQ70Z44 454 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 FKBP9P1Q75LS8 142 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 ELOA2Q8IYF1 753 aaPredicted RBP7.14□□□□□ -1.27
VPS29-212ENST00000621131 UNC5BQ8IZJ1 945 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 AMER2Q8N7J2 671 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 CDYL2Q8N8U2 506 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 FANCD2Q9BXW9 1451 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 MMRN2Q9H8L6 949 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 NCDNQ9UBB6 729 aa7.14□□□□□ -1.27
VPS29-212ENST00000621131 KLRG2A4D1S0 409 aaPredicted RBP7.13□□□□□ -1.27
VPS29-212ENST00000621131 ENPP3O14638 875 aa7.13□□□□□ -1.27
VPS29-212ENST00000621131 SUV39H1O43463 412 aa7.13□□□□□ -1.27
VPS29-212ENST00000621131 STC2O76061 302 aa7.13□□□□□ -1.27
VPS29-212ENST00000621131 SEC24DO94855 1032 aaPredicted RBP7.13□□□□□ -1.27
VPS29-212ENST00000621131 LY86O95711 162 aa7.13□□□□□ -1.27
VPS29-212ENST00000621131 NPEPPSP55786 919 aa7.13□□□□□ -1.27
VPS29-212ENST00000621131 CNGB1Q14028 1251 aaPredicted RBP7.13□□□□□ -1.27
VPS29-212ENST00000621131 TOB2Q14106 344 aaPredicted RBP7.13□□□□□ -1.27
VPS29-212ENST00000621131 FAM9AQ8IZU1 332 aaPredicted RBP7.13□□□□□ -1.27
VPS29-212ENST00000621131 MDGA1Q8NFP4 955 aa7.13□□□□□ -1.27
VPS29-212ENST00000621131 FDXACB1Q9BRP7 624 aaPredicted RBP7.13□□□□□ -1.27
VPS29-212ENST00000621131 GPR87Q9BY21 358 aa7.13□□□□□ -1.27
VPS29-212ENST00000621131 USP18Q9UMW8 372 aa7.13□□□□□ -1.27
VPS29-212ENST00000621131 NUMBLQ9Y6R0 609 aa7.13□□□□□ -1.27
VPS29-212ENST00000621131 CHD1O14646 1710 aa7.13□□□□□ -1.27
VPS29-212ENST00000621131 URB2Q14146 1524 aaKnown RBP7.12□□□□□ -1.27
VPS29-212ENST00000621131 MFAP3LO75121 409 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 ALDH1A2O94788 518 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 GPR15P49685 360 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 IL2P60568 153 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 TGFB2P61812 414 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 FRMD7Q6ZUT3 714 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 TAS1R1Q7RTX1 841 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 CXorf67Q86X51 503 aaPredicted RBP7.12□□□□□ -1.27
VPS29-212ENST00000621131 LYSMD2Q8IV50 215 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 ZNF483Q8TF39 744 aaPredicted RBP7.12□□□□□ -1.27
VPS29-212ENST00000621131 GAB3Q8WWW8 586 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 FERMT2Q96AC1 680 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 ARL8AQ96BM9 186 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 MNTQ99583 582 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 EMC7Q9NPA0 242 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 SLC2A4RGQ9NR83 387 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 ERCC6L2Q5T890 1561 aa7.12□□□□□ -1.27
VPS29-212ENST00000621131 HOXA3O43365 443 aaPredicted RBP7.11□□□□□ -1.27
VPS29-212ENST00000621131 BROXQ5VW32 411 aa7.11□□□□□ -1.27
VPS29-212ENST00000621131 ZNF662Q6ZS27 426 aa7.11□□□□□ -1.27
VPS29-212ENST00000621131 NOP9Q86U38 636 aaKnown RBP7.11□□□□□ -1.27
VPS29-212ENST00000621131 SLC41A1Q8IVJ1 513 aa7.11□□□□□ -1.27
VPS29-212ENST00000621131 LEO1Q8WVC0 666 aaPredicted RBP7.11□□□□□ -1.27
VPS29-212ENST00000621131 TRIM8Q9BZR9 551 aa7.11□□□□□ -1.27
VPS29-212ENST00000621131 SLITRK6Q9H5Y7 841 aa7.11□□□□□ -1.27
VPS29-212ENST00000621131 TBX22Q9Y458 520 aa7.11□□□□□ -1.27
VPS29-212ENST00000621131 CUX1P39880 1505 aa7.11□□□□□ -1.27
VPS29-212ENST00000621131 ZNF608Q9ULD9 1512 aaPredicted RBP7.11□□□□□ -1.27
VPS29-212ENST00000621131 ST20-MTHFSA0A0A6YYL1 179 aa7.1□□□□□ -1.27
VPS29-212ENST00000621131 CFBP00751 764 aa7.1□□□□□ -1.27
VPS29-212ENST00000621131 MANFP55145 182 aaKnown RBP7.1□□□□□ -1.27
VPS29-212ENST00000621131 DPTQ07507 201 aa7.1□□□□□ -1.27
VPS29-212ENST00000621131 PLEKHG4Q58EX7 1191 aa7.1□□□□□ -1.27
VPS29-212ENST00000621131 CCDC178Q5BJE1 867 aa7.1□□□□□ -1.27
VPS29-212ENST00000621131 NAIF1Q69YI7 327 aaPredicted RBP7.1□□□□□ -1.27
VPS29-212ENST00000621131 APBB1IPQ7Z5R6 666 aaPredicted RBP7.1□□□□□ -1.27
VPS29-212ENST00000621131 ATXN2LQ8WWM7 1075 aaKnown RBP7.1□□□□□ -1.27
VPS29-212ENST00000621131 ST8SIA2Q92186 375 aa7.1□□□□□ -1.27
VPS29-212ENST00000621131 LARP4BQ92615 738 aaKnown RBP7.1□□□□□ -1.27
VPS29-212ENST00000621131 MENTQ9BUN1 341 aa7.1□□□□□ -1.27
VPS29-212ENST00000621131 ANO3Q9BYT9 981 aa7.1□□□□□ -1.27
VPS29-212ENST00000621131 GPRC5BQ9NZH0 403 aa7.1□□□□□ -1.27
VPS29-212ENST00000621131 MAPRE3Q9UPY8 281 aa7.1□□□□□ -1.27
VPS29-212ENST00000621131 PPP2R3BQ9Y5P8 575 aa7.1□□□□□ -1.27
VPS29-212ENST00000621131 DNMBPQ6XZF7 1577 aa7.1□□□□□ -1.27
VPS29-212ENST00000621131 A0A1W2PR48 441 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 GRXCR1A8MXD5 290 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 PDE8AO60658 829 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 MYCLP1P12525 358 aaPredicted RBP7.09□□□□□ -1.27
VPS29-212ENST00000621131 BPIP17213 487 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 MAKP20794 623 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 GYS2P54840 703 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 C11orf74Q86VG3 221 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 NEU4Q8WWR8 484 aaPredicted RBP7.09□□□□□ -1.27
VPS29-212ENST00000621131 SLC5A5Q92911 643 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 WNT8AQ9H1J5 351 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 PRDM12Q9H4Q4 367 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 TRPS1Q9UHF7 1281 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 PRSS50Q9UI38 385 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 IFT140Q96RY7 1462 aa7.09□□□□□ -1.27
VPS29-212ENST00000621131 KIF21BO75037 1637 aa7.09□□□□□ -1.28
VPS29-212ENST00000621131 EIF4G3O43432 1585 aaKnown RBP7.08□□□□□ -1.28
VPS29-212ENST00000621131 CLASP1Q7Z460 1538 aa7.08□□□□□ -1.28
VPS29-212ENST00000621131 GOLGA6L6A8MZA4 724 aa7.08□□□□□ -1.28
VPS29-212ENST00000621131 NRP1O14786 923 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms