RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 C9orf78Q9NZ63 289 aaPredicted RBP4.69□□□□□ -1.66
LRRC39-204ENST00000620882 ARHGAP28Q9P2N2 729 aa4.69□□□□□ -1.66
LRRC39-204ENST00000620882 VAV3Q9UKW4 847 aa4.69□□□□□ -1.66
LRRC39-204ENST00000620882 SIK3Q9Y2K2 1263 aa4.69□□□□□ -1.66
LRRC39-204ENST00000620882 A0A088AWK7 358 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 RHPN2P1A8MT19 583 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 F8W031 263 aaPredicted RBP4.68□□□□□ -1.66
LRRC39-204ENST00000620882 CCER2I3L3R5 266 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 TSHRP16473 764 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 PFKPQ01813 784 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 IFIT5Q13325 482 aaKnown RBP4.68□□□□□ -1.66
LRRC39-204ENST00000620882 PMS2P11Q13670 270 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 CPSF6Q16630 551 aaKnown RBP eCLIP4.68□□□□□ -1.66
LRRC39-204ENST00000620882 CR1LQ2VPA4 569 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 FAM209BQ5JX69 171 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 LVRNQ6Q4G3 990 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 Q6ZVL8 140 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 CABP7Q86V35 215 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 PHKBQ93100 1093 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 SCLT1Q96NL6 688 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 DTLQ9NZJ0 730 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 GPR160Q9UJ42 338 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 GPR52Q9Y2T5 361 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 DGKBQ9Y6T7 804 aa4.68□□□□□ -1.66
LRRC39-204ENST00000620882 NUDT19A8MXV4 375 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 KITP10721 976 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 WASP42768 502 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 IL13RA1P78552 427 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 MGAT2Q10469 447 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 NOGQ13253 232 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 SIM2Q14190 667 aaPredicted RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 NOMO1Q15155 1222 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 MUM1L1Q5H9M0 696 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 ALYREFQ86V81 257 aaKnown RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 RHOT1Q8IXI2 618 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 SH2D3CQ8N5H7 860 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 PDZD8Q8NEN9 1154 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 OR10H5Q8NGA6 315 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 IL31RAQ8NI17 732 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 C18orf8Q96DM3 657 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 SLC35A4Q96G79 324 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 VRK1Q99986 396 aaPredicted RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 NOL10Q9BSC4 688 aaKnown RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 AS3MTQ9HBK9 375 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 DCP1AQ9NPI6 582 aaPredicted RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 STK32BQ9NY57 414 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 NUB1Q9Y5A7 615 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 A0A087WV62 115 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 ZNF839A8K0R7 811 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 DDX3XO00571 662 aaKnown RBP eCLIP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 SRGAP3O43295 1099 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 SEC24DO94855 1032 aaPredicted RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 AGR2O95994 175 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 IL18BPO95998 194 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 SYN1P17600 705 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 PRR5P85299 388 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 ZNF543Q08ER8 600 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 TARDBPQ13148 414 aaKnown RBP eCLIP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 PLS1Q14651 629 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 RTP5Q14D33 572 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 POLD3Q15054 466 aaPredicted RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 NR0B2Q15466 257 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 HIBCHQ6NVY1 386 aaPredicted RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 BTNL9Q6UXG8 535 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 TMC5Q6UXY8 1006 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 RPTNQ6XPR3 784 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 FAM129CQ86XR2 697 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 KRTAP19-1Q8IUB9 90 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 SUGP1Q8IWZ8 645 aaKnown RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 BCL6BQ8N143 479 aaPredicted RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 Q8N3U1 123 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 RNF152Q8N8N0 203 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 CDYL2Q8N8U2 506 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 ACRBPQ8NEB7 543 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 NSUN6Q8TEA1 469 aaKnown RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 HDAC10Q969S8 669 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 SYTL4Q96C24 671 aaPredicted RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 APIPQ96GX9 242 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 SAMD11Q96NU1 681 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 NUP62CLQ9H1M0 184 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 GREM2Q9H772 168 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 MAP3K20Q9NYL2 800 aaKnown RBP4.67□□□□□ -1.66
LRRC39-204ENST00000620882 NRBP1Q9UHY1 535 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 PCDHA3Q9Y5H8 950 aa4.67□□□□□ -1.66
LRRC39-204ENST00000620882 A0A0A6YYJ9 748 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 POM121BA6NF01 834 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 SLC26A4O43511 780 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 STT3AP46977 705 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 MGAT5Q09328 741 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 NKAPLQ5M9Q1 402 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 KANK2Q63ZY3 851 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 CIAPIN1Q6FI81 312 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 KLHDC10Q6PID8 442 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 ABHD15Q6UXT9 468 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 SESTD1Q86VW0 696 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 MYLK4Q86YV6 388 aaPredicted RBP4.66□□□□□ -1.66
LRRC39-204ENST00000620882 MYCT1Q8N699 235 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 ANKS1AQ92625 1134 aa4.66□□□□□ -1.66
LRRC39-204ENST00000620882 SECISBP2LQ93073 1101 aaKnown RBP4.66□□□□□ -1.66
LRRC39-204ENST00000620882 FATE1Q969F0 183 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms