RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 CDKL2Q92772 493 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 DACT3Q96B18 629 aaPredicted RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 PRMT1Q99873 361 aaKnown RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 KCND1Q9NSA2 647 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 ABCF3Q9NUQ8 709 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 NXF1Q9UBU9 619 aaKnown RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 SLC12A6Q9UHW9 1150 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 DAGLAQ9Y4D2 1042 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 RASA4BC9J798 803 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 RASA4O43374 803 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 GGPS1O95749 300 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 ACTN3Q08043 901 aaPredicted RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 GRB10Q13322 594 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 NT5DC1Q5TFE4 455 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 C1orf54Q8WWF1 131 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 SAAL1Q96ER3 474 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 SNF8Q96H20 258 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 FAM213AQ9BRX8 229 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 TUFT1Q9NNX1 390 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 DUSP10Q9Y6W6 482 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 SLC37A4O43826 429 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 CA4P22748 312 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 OSTNP61366 133 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 CAV1Q03135 178 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 MAP3K21Q5TCX8 1036 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 MORC4Q8TE76 937 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 PYROXD1Q8WU10 500 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 CALN1Q9BXU9 219 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 RAVER2Q9HCJ3 691 aaKnown RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 ADAM22Q9P0K1 906 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 C3P01024 1663 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 SLC9A1P19634 815 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 NFIXQ14938 502 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 BBS9Q3SYG4 887 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 WDR93Q6P2C0 686 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 EXOC8Q8IYI6 725 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 CLGNO14967 610 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 CHUKO15111 745 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 MEFVO15553 781 aaPredicted RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 PSMA2P25787 234 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 GALCP54803 685 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 CDR2Q01850 454 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 SUPT20HL1Q3ZLR7 823 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 EARS2Q5JPH6 523 aaKnown RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 FBXW10Q5XX13 1052 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 FAM47EQ6ZV65 393 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 TRIM42Q8IWZ5 723 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 USP38Q8NB14 1042 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 PSPC1Q8WXF1 523 aaKnown RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 ATP6V0A4Q9HBG4 840 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 OLA1Q9NTK5 396 aaKnown RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 A0A087X0B3 334 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 KRT14P02533 472 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 SERPINB6P35237 376 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 IRX4P78413 519 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 KRT17Q04695 432 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 SPARCL1Q14515 664 aa8.91□□□□□ -0.98
ALMS1-208ENST00000620466 SRRM1Q8IYB3 904 aaKnown RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 TGS1Q96RS0 853 aaKnown RBP8.91□□□□□ -0.98
ALMS1-208ENST00000620466 RTN2O75298 545 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 P4HBP07237 508 aaKnown RBP8.9□□□□□ -0.98
ALMS1-208ENST00000620466 MDM2Q00987 491 aaPredicted RBP8.9□□□□□ -0.98
ALMS1-208ENST00000620466 MARCH10Q8NA82 808 aaPredicted RBP8.9□□□□□ -0.98
ALMS1-208ENST00000620466 SDCCAG3Q96C92 435 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 STK33Q9BYT3 514 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 JMJD4Q9H9V9 463 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 DENND3A2RUS2 1198 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 GOLGA8MH3BSY2 632 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 PHF2O75151 1096 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 SLC12A1Q13621 1099 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 COL9A3Q14050 684 aaPredicted RBP8.9□□□□□ -0.98
ALMS1-208ENST00000620466 PAPD7Q5XG87 772 aaKnown RBP8.9□□□□□ -0.98
ALMS1-208ENST00000620466 INTS5Q6P9B9 1019 aaKnown RBP8.9□□□□□ -0.98
ALMS1-208ENST00000620466 ERICH1Q86X53 443 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 FBXO41Q8TF61 875 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 SYN2Q92777 582 aaPredicted RBP8.9□□□□□ -0.98
ALMS1-208ENST00000620466 CCT8L2Q96SF2 557 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 KLC4Q9NSK0 619 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 PFASO15067 1338 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 FAM205AQ6ZU69 1335 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 DCTN3O75935 186 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 KLRC1P26715 233 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 SSTR3P32745 418 aaPredicted RBP8.9□□□□□ -0.98
ALMS1-208ENST00000620466 DBN1Q16643 649 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 CCDC93Q567U6 631 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 KIAA1841Q6NSI8 718 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 PDZD8Q8NEN9 1154 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 TBC1D16Q8TBP0 767 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 CASKIN2Q8WXE0 1202 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 RBM41Q96IZ5 413 aaKnown RBP8.9□□□□□ -0.98
ALMS1-208ENST00000620466 C11orf70Q9BRQ4 267 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 TUBB6Q9BUF5 446 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 APEX2Q9UBZ4 518 aa8.9□□□□□ -0.98
ALMS1-208ENST00000620466 IQANK1A0A1B0GTG1 560 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 INO80B-WBP1J3KQ70 363 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 SLC26A4O43511 780 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 CHN1P15882 459 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 MARK3P27448 753 aa8.9□□□□□ -0.99
ALMS1-208ENST00000620466 IREB2P48200 963 aaKnown RBP8.9□□□□□ -0.99
ALMS1-208ENST00000620466 IRAK1P51617 712 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms