RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 RNF214Q8ND24 703 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 DNAJB3Q8WWF6 145 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 TSG101Q99816 390 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 DUSP9Q99956 384 aaKnown RBP8.82□□□□□ -1
CPNE3-209ENST00000620393 KIFC3Q9BVG8 833 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 SENP6Q9GZR1 1112 aaPredicted RBP8.82□□□□□ -1
CPNE3-209ENST00000620393 MCOLN1Q9GZU1 580 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 FAM49AQ9H0Q0 323 aaPredicted RBP8.82□□□□□ -1
CPNE3-209ENST00000620393 ADAMTS10Q9H324 1103 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 IFT122Q9HBG6 1241 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 EXOC7Q9UPT5 735 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 CTNND2Q9UQB3 1225 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 TRAF3IP3Q9Y228 551 aa8.82□□□□□ -1
CPNE3-209ENST00000620393 PHLPP2Q6ZVD8 1323 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 ADGRA3Q8IWK6 1321 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 A0A087WZ62 844 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 TRIM49BA6NDI0 452 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 GOLGA6L19H0YKK7 550 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 CALUO43852 315 aaPredicted RBP8.81□□□□□ -1
CPNE3-209ENST00000620393 GPR32O75388 356 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 FGFR1OPO95684 399 aaKnown RBP8.81□□□□□ -1
CPNE3-209ENST00000620393 PHKA2P46019 1235 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 FKBP3Q00688 224 aaKnown RBP8.81□□□□□ -1
CPNE3-209ENST00000620393 STRN3Q13033 797 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 PTK7Q13308 1070 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 MYBPC2Q14324 1141 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 NFIL3Q16649 462 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 MAPK6Q16659 721 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 EDRF1Q3B7T1 1238 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 ZCWPW2Q504Y3 356 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 TAS1R3Q7RTX0 852 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 SRGAP1Q7Z6B7 1085 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 RSPH3Q86UC2 560 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 MAP4K3Q8IVH8 894 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 ZBTB8OSQ8IWT0 167 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 AOPEPQ8N6M6 819 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 GOLGA5Q8TBA6 731 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 NOC3LQ8WTT2 800 aaKnown RBP8.81□□□□□ -1
CPNE3-209ENST00000620393 TMEM174Q8WUU8 243 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 NLRP4Q96MN2 994 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 CTAGE1Q96RT6 745 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 FDXACB1Q9BRP7 624 aaPredicted RBP8.81□□□□□ -1
CPNE3-209ENST00000620393 SRRTQ9BXP5 876 aaKnown RBP8.81□□□□□ -1
CPNE3-209ENST00000620393 GCOM2Q9BZD3 368 aaPredicted RBP8.81□□□□□ -1
CPNE3-209ENST00000620393 GBP3Q9H0R5 595 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 FZD8Q9H461 694 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 TYW1Q9NV66 732 aaKnown RBP8.81□□□□□ -1
CPNE3-209ENST00000620393 FANCLQ9NW38 375 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 CGNQ9P2M7 1197 aaKnown RBP8.81□□□□□ -1
CPNE3-209ENST00000620393 NFE2L3Q9Y4A8 694 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 DOCK5Q9H7D0 1870 aa8.81□□□□□ -1
CPNE3-209ENST00000620393 ACKR2O00590 384 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 PIGRP01833 764 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 COL6A1P12109 1028 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 EIF4BP23588 611 aaKnown RBP8.8□□□□□ -1
CPNE3-209ENST00000620393 RPL13P26373 211 aaKnown RBP8.8□□□□□ -1
CPNE3-209ENST00000620393 CRYBB1P53674 252 aaPredicted RBP8.8□□□□□ -1
CPNE3-209ENST00000620393 TPM4P67936 248 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 MBTD1Q05BQ5 628 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 ADAM9Q13443 819 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 TPD52L1Q16890 204 aaPredicted RBP8.8□□□□□ -1
CPNE3-209ENST00000620393 FAM187BQ17R55 369 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 KIZQ2M2Z5 673 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 VARS2Q5ST30 1063 aaKnown RBP8.8□□□□□ -1
CPNE3-209ENST00000620393 SLC39A5Q6ZMH5 540 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 HS2ST1Q7LGA3 356 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 FILIP1Q7Z7B0 1213 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 C12orf56Q8IXR9 622 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 ZC3H3Q8IXZ2 948 aaKnown RBP8.8□□□□□ -1
CPNE3-209ENST00000620393 CSGALNACT2Q8N6G5 542 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 NLRP7Q8WX94 980 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 ZNF668Q96K58 619 aaPredicted RBP8.8□□□□□ -1
CPNE3-209ENST00000620393 CELF4Q9BZC1 486 aaKnown RBP8.8□□□□□ -1
CPNE3-209ENST00000620393 INO80BQ9C086 356 aaPredicted RBP8.8□□□□□ -1
CPNE3-209ENST00000620393 CCDC113Q9H0I3 377 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 TRPV6Q9H1D0 765 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 HSD3B7Q9H2F3 369 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 THAP9Q9H5L6 903 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 MINDY3Q9H8M7 445 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 CDHR5Q9HBB8 845 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 SAMSN1Q9NSI8 373 aaKnown RBP8.8□□□□□ -1
CPNE3-209ENST00000620393 TRMT13Q9NUP7 481 aaKnown RBP8.8□□□□□ -1
CPNE3-209ENST00000620393 PRMT7Q9NVM4 692 aaPredicted RBP8.8□□□□□ -1
CPNE3-209ENST00000620393 DMAC2Q9NW81 257 aa8.8□□□□□ -1
CPNE3-209ENST00000620393 HTTP42858 3142 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 ANKRD63C9JTQ0 380 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 INO80B-WBP1J3KQ70 363 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 CETN3O15182 167 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 CLIC2O15247 247 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 B4GALT4O60513 344 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 CAND2O75155 1236 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 NR3C1P04150 777 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 PRKCBP05771 671 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 IQCF3P0C7M6 154 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 DARSP14868 501 aaKnown RBP8.79□□□□□ -1
CPNE3-209ENST00000620393 ZNF18P17022 549 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 CDK11BP21127 795 aaKnown RBP8.79□□□□□ -1
CPNE3-209ENST00000620393 MRE11P49959 708 aa8.79□□□□□ -1
CPNE3-209ENST00000620393 MRPS6P82932 125 aaKnown RBP8.79□□□□□ -1
CPNE3-209ENST00000620393 TMEM62Q0P6H9 643 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms