RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 NDUFB10O96000 172 aa13.19□□□□□ -0.3
SPCS1-206ENST00000619898 ELF1P32519 619 aa13.19□□□□□ -0.3
SPCS1-206ENST00000619898 LMNB2Q03252 620 aa13.19□□□□□ -0.3
SPCS1-206ENST00000619898 BARGINQ6ZT62 677 aa13.19□□□□□ -0.3
SPCS1-206ENST00000619898 TRPM8Q7Z2W7 1104 aa13.19□□□□□ -0.3
SPCS1-206ENST00000619898 DNAJC19Q96DA6 116 aa13.19□□□□□ -0.3
SPCS1-206ENST00000619898 TRIM11Q96F44 468 aa13.19□□□□□ -0.3
SPCS1-206ENST00000619898 TDRD3Q9H7E2 651 aaKnown RBP13.19□□□□□ -0.3
SPCS1-206ENST00000619898 F8VZ95 297 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 IPO5O00410 1097 aaKnown RBP13.18□□□□□ -0.3
SPCS1-206ENST00000619898 CLDN3O15551 220 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 PHBP35232 272 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 SCTRP47872 440 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 ALCAMQ13740 583 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 ARHGEF16Q5VV41 709 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 C18orf8Q96DM3 657 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 SAAL1Q96ER3 474 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 ETNK1Q9HBU6 452 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 FGFR1OP2Q9NVK5 253 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 RTN2O75298 545 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 MMP10P09238 476 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 RFX1P22670 979 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 PPP2R5AQ15172 486 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 HP1BP3Q5SSJ5 553 aaPredicted RBP13.18□□□□□ -0.3
SPCS1-206ENST00000619898 TMC3Q7Z5M5 1100 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 SLC30A5Q8TAD4 765 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 DEPTORQ8TB45 409 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 FOXN3O00409 490 aaPredicted RBP13.18□□□□□ -0.3
SPCS1-206ENST00000619898 CIB2O75838 187 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 GGPS1O95749 300 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
SPCS1-206ENST00000619898 RINT1Q6NUQ1 792 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 CEP170P1Q96L14 293 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 SH3GL2Q99962 352 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 KIF1AQ12756 1690 aa13.18□□□□□ -0.3
SPCS1-206ENST00000619898 DDX3XO00571 662 aaKnown RBP eCLIP13.17□□□□□ -0.34e-20■■■■□ 21.9
SPCS1-206ENST00000619898 EIF2AK2P19525 551 aaKnown RBP13.17□□□□□ -0.3
SPCS1-206ENST00000619898 PLCB4Q15147 1175 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 CDC42EP5Q6NZY7 148 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 EPM2AIP1Q7L775 607 aaPredicted RBP13.17□□□□□ -0.3
SPCS1-206ENST00000619898 TUFT1Q9NNX1 390 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 ANKFY1Q9P2R3 1169 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 TTC7AQ9ULT0 858 aaPredicted RBP13.17□□□□□ -0.3
SPCS1-206ENST00000619898 ARFGEF2Q9Y6D5 1785 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 LRRIQ4A6NIV6 560 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 MSH4O15457 936 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 TLR2O60603 784 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 SHOX2O60902 331 aaPredicted RBP13.17□□□□□ -0.3
SPCS1-206ENST00000619898 ZBED4O75132 1171 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 KRT1P04264 644 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 ITGB3BPQ13352 177 aaPredicted RBP13.17□□□□□ -0.3
SPCS1-206ENST00000619898 CEP55Q53EZ4 464 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 RC3H1Q5TC82 1133 aaKnown RBP13.17□□□□□ -0.3
SPCS1-206ENST00000619898 MCF2L2Q86YR7 1114 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 MREGQ8N565 214 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 C3orf20Q8ND61 904 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 KCNV2Q8TDN2 545 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 EPS8L3Q8TE67 593 aaKnown RBP13.17□□□□□ -0.3
SPCS1-206ENST00000619898 ZNF384Q8TF68 577 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 HAUS1Q96CS2 278 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 MKNK1Q9BUB5 465 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
SPCS1-206ENST00000619898 USP15Q9Y4E8 981 aaPredicted RBP13.17□□□□□ -0.3
SPCS1-206ENST00000619898 AFF2P51816 1311 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 LUC7L3O95232 432 aaKnown RBP13.17□□□□□ -0.3
SPCS1-206ENST00000619898 DYNLT1P63172 113 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 HGSNATQ68CP4 663 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 PASD1Q8IV76 773 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 ARHGAP24Q8N264 748 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 PPP1R9AQ9ULJ8 1098 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 GINS2Q9Y248 185 aa13.17□□□□□ -0.3
SPCS1-206ENST00000619898 TMEM120BA0PK00 339 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 H0Y3Z8 333 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 I3L4J1 428 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 SLC26A4O43511 780 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 FSBPO95073 299 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 CASP5P51878 434 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 SPATA21Q7Z572 469 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 MORC4Q8TE76 937 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 HAS1Q92839 578 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 RNF25Q96BH1 459 aaPredicted RBP13.16□□□□□ -0.3
SPCS1-206ENST00000619898 C11orf70Q9BRQ4 267 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 VCXQ9H320 206 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 GPR162Q16538 588 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 KYNUQ16719 465 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 SLC30A10Q6XR72 485 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 HAUS6Q7Z4H7 955 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 NT5DC3Q86UY8 548 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 CD302Q8IX05 232 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 SCYL3Q8IZE3 742 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 KIF2BQ8N4N8 673 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 SLC35C1Q96A29 364 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 SNF8Q96H20 258 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 C9orf72Q96LT7 481 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 AGPAT3Q9NRZ7 376 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.16□□□□□ -0.3
SPCS1-206ENST00000619898 LRRD1A4D1F6 860 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 MAPK13O15264 365 aa13.16□□□□□ -0.3
SPCS1-206ENST00000619898 TNFAIP1Q13829 316 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms