RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 ANKRD31Q8N7Z5 1873 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SETDB1Q15047 1291 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 HHIPL2Q6UWX4 724 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 MIGA2Q7L4E1 593 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 EGFL6Q8IUX8 553 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ERP27Q96DN0 273 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 NUDCD1Q96RS6 583 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RIC8AQ9NPQ8 531 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 DDX25Q9UHL0 483 aaKnown RBP14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ZMYND8Q9ULU4 1186 aaPredicted RBP14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 AFPP02771 609 aaKnown RBP14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PLA2G4BP0C869 781 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 TRIM49P0CI25 452 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 TRIM49CP0CI26 452 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SNAP25P60880 206 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SPATA21Q7Z572 469 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CSRNP1Q96S65 589 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PABPC3Q9H361 631 aaKnown RBP14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SUGT1Q9Y2Z0 365 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 GAKO14976 1311 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 POC1B-GALNT4F8VUJ3 575 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 GBP1P32455 592 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ADCY7P51828 1080 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CASP5P51878 434 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 EIF3BP55884 814 aaKnown RBP14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 KYNUQ16719 465 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SYCE1Q8N0S2 351 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 TMED2Q15363 201 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 TMEM154Q6P9G4 183 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SLC30A9Q6PML9 568 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 NLGN2Q8NFZ4 835 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 UPF1Q92900 1129 aaKnown RBP eCLIP14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 FAM163AQ96GL9 167 aaPredicted RBP14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 NAF1Q96HR8 494 aaKnown RBP14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 DDTLA6NHG4 134 aaPredicted RBP14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 THAP12O43422 761 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 KCNA3P22001 575 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 C6orf118Q5T5N4 469 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CIAPIN1Q6FI81 312 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CCDC137Q6PK04 289 aaKnown RBP14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SFR1Q86XK3 245 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RMDN2Q96LZ7 410 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PITPNM3Q9BZ71 974 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 TAS2R14Q9NYV8 317 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 AJAP1Q9UKB5 411 aaPredicted RBP14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ZNRF3Q9ULT6 936 aa14.73□□□□□ -0.05
CNTNAP3B-215ENST00000619138 TNS1Q9HBL0 1735 aaKnown RBP14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CFAP73A6NFT4 308 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RTN2O75298 545 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RARAP10276 462 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RANBP1P43487 201 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RPL21P46778 160 aaKnown RBP14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SLC8A3P57103 927 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CXCL9Q07325 125 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 KCNA1Q09470 495 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ZYXQ15942 572 aaKnown RBP14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 LACTB2Q53H82 288 aaPredicted RBP14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RSBN1LQ6PCB5 846 aaPredicted RBP14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 KRT35Q92764 455 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 C9orf72Q96LT7 481 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 THAP2Q9H0W7 228 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SLITRK6Q9H5Y7 841 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PIDD1Q9HB75 910 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ALG13Q9NP73 1137 aaKnown RBP14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 DCTN4Q9UJW0 460 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PVALEFA0A1B0GWK0 134 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SPDYE5A6NIY4 337 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USP17L15C9J2P7 530 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USP17L13C9JLJ4 530 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USP17L11C9JVI0 530 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USP17L18D6R9N7 530 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USP17L22D6RA61 530 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USP17L17D6RBQ6 530 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USP17L19D6RCP7 530 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USP17L20D6RJB6 530 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SNX3O60493 162 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 LCA5LO95447 670 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USP17L24Q0WX57 530 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 DNAJC3Q13217 504 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CERKLQ49MI3 558 aaPredicted RBP14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SEL1L2Q5TEA6 688 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USP17L6PQ6QN14 398 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 C16orf86Q6ZW13 317 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ACTRT1Q8TDG2 376 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ARHGEF26Q96DR7 871 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ZFATQ9P243 1243 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 DPPA5A6NC42 116 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 LAD1O00515 517 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 DDX3XO00571 662 aaKnown RBP eCLIP14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 TBCAO75347 108 aaKnown RBP14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PIAS1O75925 651 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 DLATP10515 647 aaKnown RBP14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CCND1P24385 295 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SHROOM1Q2M3G4 852 aaPredicted RBP14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CPNE8Q86YQ8 564 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 FITM2Q8N6M3 262 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RBM46Q8TBY0 533 aaKnown RBP14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PAGR1Q9BTK6 254 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 MAGEF1Q9HAY2 307 aa14.72□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RSPH10B2B2RC85 870 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms