RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 HPS3Q969F9 1004 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ITFG2Q969R8 447 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 EML4Q9HC35 981 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 ABCA8O94911 1581 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TOM1L1O75674 476 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 PPP1R37O75864 691 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 PLEKHA8P1O95397 391 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TAC1P20366 129 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 IL1RL1Q01638 556 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 THOC5Q13769 683 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 DHX34Q14147 1143 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 EAPPQ56P03 285 aaPredicted RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 ICA1LQ8NDH6 482 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 CD44P16070 742 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 CHRNA3P32297 505 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 IFNAR2P48551 515 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TNFAIP2Q03169 654 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ERICH1Q86X53 443 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 NDE1Q9NXR1 346 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 KIAA0100Q14667 2235 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 NCK2O43639 380 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 AGTP01019 485 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ALAS1P13196 640 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 DUOXA2Q1HG44 320 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ACAD11Q709F0 780 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 METTL23Q86XA0 190 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 MTURNQ8N3F0 131 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 SYT2Q8N9I0 419 aaPredicted RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 SLC7A3Q8WY07 619 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 RIN2Q8WYP3 895 aaPredicted RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 PPP2R5CQ13362 524 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 NEDD1Q8NHV4 660 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 CYFIP2Q96F07 1278 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TMEM47Q9BQJ4 181 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 POLR3CQ9BUI4 534 aaPredicted RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 SLC13A1Q9BZW2 595 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 KCND2Q9NZV8 630 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 FBXL5Q9UKA1 691 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 CCPG1Q9ULG6 757 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 USP15Q9Y4E8 981 aaPredicted RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 ZHX2Q9Y6X8 837 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 SFI1A8K8P3 1242 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 MXI1P50539 228 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ANO5Q75V66 913 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 SNF8Q96H20 258 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 AS3MTQ9HBK9 375 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 DDX56Q9NY93 547 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 ORC6Q9Y5N6 252 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TARBP1Q13395 1621 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 UBN2Q6ZU65 1347 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 S100BP04271 92 aaPredicted RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 AP3M2P53677 418 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 COL9A3Q14050 684 aaPredicted RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 NFRKBQ6P4R8 1299 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 CAPN12Q6ZSI9 719 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TRPM8Q7Z2W7 1104 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ZNF473Q8WTR7 871 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 THOC1Q96FV9 657 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 SEC16BQ96JE7 1060 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 POLD4Q9HCU8 107 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 SMARCAL1Q9NZC9 954 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ADAM22Q9P0K1 906 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 EXOC1LA0A1B0GW35 172 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ARHGEF37A1IGU5 675 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 SMAPO00193 183 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 XPOTO43592 962 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 PSMC5P62195 406 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 GRIN1Q05586 938 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.25□□□□□ -1.89
LPP-221ENST00000618621 XXYLT1Q8NBI6 393 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 PARVAQ9NVD7 372 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 DDX20Q9UHI6 824 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 CYP19A1P11511 503 aaPredicted RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 CARSP49589 748 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 COPS2P61201 443 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 SLC9A5Q14940 896 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 RSPH3Q86UC2 560 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ACTRT1Q8TDG2 376 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 RAPGEF5Q92565 580 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 PPWD1Q96BP3 646 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 BORCS6Q96GS4 357 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TIPINQ9BVW5 301 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TBK1Q9UHD2 729 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 GPC6Q9Y625 555 aaPredicted RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 CDHR2Q9BYE9 1310 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 MYO10Q9HD67 2058 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 USP17L5A8MUK1 530 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 XPAP23025 273 aaPredicted RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 RFX5P48382 616 aaPredicted RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 SERPINB4P48594 390 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 STAT2P52630 851 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 CDKAL1Q5VV42 579 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 KRT80Q6KB66 452 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 TMEM179Q6ZVK1 233 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 DDI1Q8WTU0 396 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 HDAC7Q8WUI4 952 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 CELF1Q92879 486 aaKnown RBP3.25□□□□□ -1.89
LPP-221ENST00000618621 SDCCAG3Q96C92 435 aa3.25□□□□□ -1.89
LPP-221ENST00000618621 ADPGKQ9BRR6 497 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms