RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 ESR2Q92731 530 aa13.11□□□□□ -0.31
MATR3-227ENST00000618441 PUS3Q9BZE2 481 aaKnown RBP13.11□□□□□ -0.31
MATR3-227ENST00000618441 HEY1Q9Y5J3 304 aa13.11□□□□□ -0.31
MATR3-227ENST00000618441 USP32Q8NFA0 1604 aa13.11□□□□□ -0.31
MATR3-227ENST00000618441 RPL13P26373 211 aaKnown RBP13.1□□□□□ -0.31
MATR3-227ENST00000618441 CETN2P41208 172 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 PPP2R5BQ15173 497 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
MATR3-227ENST00000618441 HP1BP3Q5SSJ5 553 aaPredicted RBP13.1□□□□□ -0.31
MATR3-227ENST00000618441 KLC3Q6P597 504 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 BAG3O95817 575 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 LMNAP02545 664 aaKnown RBP13.1□□□□□ -0.31
MATR3-227ENST00000618441 HOXD12P35452 270 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 ADD2P35612 726 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 TBL3Q12788 808 aaKnown RBP13.1□□□□□ -0.31
MATR3-227ENST00000618441 SEPT6Q14141 434 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 DUS1LQ6P1R4 473 aaKnown RBP13.1□□□□□ -0.31
MATR3-227ENST00000618441 UBE2Q1Q7Z7E8 422 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 MTDHQ86UE4 582 aaKnown RBP13.1□□□□□ -0.31
MATR3-227ENST00000618441 DCAF5Q96JK2 942 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 TIPINQ9BVW5 301 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 ASCC2Q9H1I8 757 aaPredicted RBP13.1□□□□□ -0.31
MATR3-227ENST00000618441 ADAM7Q9H2U9 754 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 PALLDQ8WX93 1383 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 CALCOCO2Q13137 446 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 MTMR2Q13614 643 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 ITGA7Q13683 1181 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 NTRK3Q16288 839 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 CCDC84Q86UT8 332 aaPredicted RBP13.1□□□□□ -0.31
MATR3-227ENST00000618441 NELFCDQ8IXH7 590 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 CRACR2BQ8N4Y2 399 aaPredicted RBP13.1□□□□□ -0.31
MATR3-227ENST00000618441 TRAF3IP3Q9Y228 551 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 MST1RQ04912 1400 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 ALDH1B1P30837 517 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 PLOD1Q02809 727 aaPredicted RBP13.1□□□□□ -0.31
MATR3-227ENST00000618441 MGAT5Q09328 741 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 GALNTL6Q49A17 601 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 CYP4F22Q6NT55 531 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 NRG4Q8WWG1 115 aa13.1□□□□□ -0.31
MATR3-227ENST00000618441 ARHGAP42A6NI28 874 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 NEURL1BA8MQ27 555 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 CCDC166P0CW27 439 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 IFNAR1P17181 557 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 KRT15P19012 456 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 CCNE1P24864 410 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 KCNJ1P48048 391 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 HPCAP84074 193 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 LSAMPQ13449 338 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 NAB2Q15742 525 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 RBM44Q6ZP01 1051 aaKnown RBP13.09□□□□□ -0.31
MATR3-227ENST00000618441 SH3RF1Q7Z6J0 888 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 SYNE4Q8N205 404 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 SREK1Q8WXA9 508 aaKnown RBP13.09□□□□□ -0.31
MATR3-227ENST00000618441 APPBP2Q92624 585 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
MATR3-227ENST00000618441 TCEAL9Q9UHQ7 104 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 TUFMP49411 452 aaKnown RBP13.09□□□□□ -0.31
MATR3-227ENST00000618441 POLGP54098 1239 aaPredicted RBP13.09□□□□□ -0.31
MATR3-227ENST00000618441 IL9RQ01113 521 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 GRAMD1BQ3KR37 738 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 ACSBG2Q5FVE4 666 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 PDXDC1Q6P996 788 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 DTHD1Q6ZMT9 781 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.31
MATR3-227ENST00000618441 LY9Q9HBG7 655 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 FAM217BQ9NTX9 383 aaPredicted RBP13.09□□□□□ -0.31
MATR3-227ENST00000618441 ASIC3Q9UHC3 531 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 WDR37Q9Y2I8 494 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 E7ENQ6 273 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 POC1B-GALNT4F8VUJ3 575 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 TOM1O60784 492 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 AUHQ13825 339 aaKnown RBP13.09□□□□□ -0.31
MATR3-227ENST00000618441 SCARF1Q14162 830 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 ASRGL1Q7L266 308 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 ZNF572Q7Z3I7 529 aaPredicted RBP13.09□□□□□ -0.31
MATR3-227ENST00000618441 PHLDB2Q86SQ0 1253 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 WDR17Q8IZU2 1322 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 DRC3Q9H069 523 aa13.09□□□□□ -0.31
MATR3-227ENST00000618441 TROVE2P10155 538 aaKnown RBP eCLIP13.08□□□□□ -0.329e-6■□□□□ 8.9
MATR3-227ENST00000618441 ESRRAP11474 423 aaPredicted RBP13.08□□□□□ -0.32
MATR3-227ENST00000618441 VCAM1P19320 739 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 NAA20P61599 178 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 FAM83BQ5T0W9 1011 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 TTI2Q6NXR4 508 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 TMEM87BQ96K49 555 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 COPRSQ9NQ92 184 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 NDE1Q9NXR1 346 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 AMFRQ9UKV5 643 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 CIB2O75838 187 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 PSMG1O95456 288 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 TFPTP0C1Z6 253 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 HARSP12081 509 aaKnown RBP13.08□□□□□ -0.32
MATR3-227ENST00000618441 GRM1Q13255 1194 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 MED21Q13503 144 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 AADACL2Q6P093 401 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 CCDC62Q6P9F0 684 aa13.08□□□□□ -0.32
MATR3-227ENST00000618441 ARHGEF18Q6ZSZ5 1173 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms