RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CENPFP49454 3210 aa13.46□□□□□ -0.26
CIITA-212ENST00000618207 MAP2K7O14733 419 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 IRF6O14896 467 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 CEP104O60308 925 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 PSAPP07602 524 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 FDX1P10109 184 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 PRKCIP41743 596 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 RPS6KA1Q15418 735 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 CFAP221Q4G0U5 840 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 C1orf220Q5T0J3 134 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 CCDC70Q6NSX1 233 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 C8orf74Q6P047 294 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 HNRNPLLQ8WVV9 542 aaKnown RBP13.45□□□□□ -0.26
CIITA-212ENST00000618207 TAF4BQ92750 862 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 RPGRIP1Q96KN7 1286 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 LOXHD1Q8IVV2 1947 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 IGSF9BQ9UPX0 1349 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 LYPLA2O95372 231 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 TUBB4BP68371 445 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 CETN1Q12798 172 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 GNPTABQ3T906 1256 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 MEI1Q5TIA1 1274 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 WDR93Q6P2C0 686 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 SLC9A9Q8IVB4 645 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 SULF1Q8IWU6 871 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 KRT12Q99456 494 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 PI4K2AQ9BTU6 479 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 AP1M1Q9BXS5 423 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 TMEM117Q9H0C3 514 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 XPNPEP1Q9NQW7 623 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 ANKEF1Q9NU02 776 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 PCDHGC5Q9Y5F6 944 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 HARSP12081 509 aaKnown RBP13.45□□□□□ -0.26
CIITA-212ENST00000618207 NFIL3Q16649 462 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 PEX26Q7Z412 305 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 ADAT2Q7Z6V5 191 aaKnown RBP13.45□□□□□ -0.26
CIITA-212ENST00000618207 LMO3Q8TAP4 145 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 FBXO41Q8TF61 875 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 DCPSQ96C86 337 aaKnown RBP13.45□□□□□ -0.26
CIITA-212ENST00000618207 ZNF668Q96K58 619 aaPredicted RBP13.45□□□□□ -0.26
CIITA-212ENST00000618207 C12orf42Q96LP6 360 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 FAM213AQ9BRX8 229 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 POLR3FQ9H1D9 316 aaPredicted RBP13.45□□□□□ -0.26
CIITA-212ENST00000618207 VPS18Q9P253 973 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 CSADQ9Y600 493 aa13.45□□□□□ -0.26
CIITA-212ENST00000618207 ATP8B1O43520 1251 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
CIITA-212ENST00000618207 PGK2P07205 417 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 MARK3P27448 753 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 POLGP54098 1239 aaPredicted RBP13.44□□□□□ -0.26
CIITA-212ENST00000618207 NCKAP1LP55160 1127 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 PRPF4BQ13523 1007 aaKnown RBP13.44□□□□□ -0.26
CIITA-212ENST00000618207 NAA35Q5VZE5 725 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 IFT81Q8WYA0 676 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 SEMA4DQ92854 862 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 ARHGEF26Q96DR7 871 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 THAP2Q9H0W7 228 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 CYP26B1Q9NR63 512 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 ADAMTS5Q9UNA0 930 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 LRRIQ4A6NIV6 560 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 TMEM110-MUSTN1A8MSY1 372 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
CIITA-212ENST00000618207 PRLRP16471 622 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 STXBP2Q15833 593 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 SEZ6Q53EL9 994 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 SLC39A4Q6P5W5 647 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 TPCN2Q8NHX9 752 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 SLC35G2Q8TBE7 412 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 FHDC1Q9C0D6 1143 aaPredicted RBP13.44□□□□□ -0.26
CIITA-212ENST00000618207 FBXL5Q9UKA1 691 aa13.44□□□□□ -0.26
CIITA-212ENST00000618207 ATMINO43313 823 aaPredicted RBP13.43□□□□□ -0.26
CIITA-212ENST00000618207 GABPB1Q06547 395 aaPredicted RBP13.43□□□□□ -0.26
CIITA-212ENST00000618207 TRADDQ15628 312 aa13.43□□□□□ -0.26
CIITA-212ENST00000618207 CCNI2Q6ZMN8 369 aaPredicted RBP13.43□□□□□ -0.26
CIITA-212ENST00000618207 SND1Q7KZF4 910 aaKnown RBP eCLIP13.43□□□□□ -0.26
CIITA-212ENST00000618207 CTNNBL1Q8WYA6 563 aaPredicted RBP13.43□□□□□ -0.26
CIITA-212ENST00000618207 DHX38Q92620 1227 aaKnown RBP13.43□□□□□ -0.26
CIITA-212ENST00000618207 SELENOOQ9BVL4 669 aa13.43□□□□□ -0.26
CIITA-212ENST00000618207 CYP26A1O43174 497 aa13.43□□□□□ -0.26
CIITA-212ENST00000618207 KIF4AO95239 1232 aa13.43□□□□□ -0.26
CIITA-212ENST00000618207 SGPL1O95470 568 aa13.43□□□□□ -0.26
CIITA-212ENST00000618207 ACOT2P49753 483 aa13.43□□□□□ -0.26
CIITA-212ENST00000618207 ALCAMQ13740 583 aa13.43□□□□□ -0.26
CIITA-212ENST00000618207 EPC2Q52LR7 807 aa13.43□□□□□ -0.26
CIITA-212ENST00000618207 ABHD15Q6UXT9 468 aa13.43□□□□□ -0.26
CIITA-212ENST00000618207 TAS1R2Q8TE23 839 aa13.43□□□□□ -0.26
CIITA-212ENST00000618207 ZBTB45Q96K62 511 aaPredicted RBP13.43□□□□□ -0.26
CIITA-212ENST00000618207 STBD1O95210 358 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 GLI1P08151 1106 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 ATP4AP20648 1035 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 OAZ1P54368 228 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 GUCY2DQ02846 1103 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 LLGL1Q15334 1064 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 MIS18BP1Q6P0N0 1132 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 CCDC125Q86Z20 511 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 RPUSD2Q8IZ73 545 aaKnown RBP13.42□□□□□ -0.26
CIITA-212ENST00000618207 MMGT1Q8N4V1 131 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 METTL13Q8N6R0 699 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 IFT74Q96LB3 600 aa13.42□□□□□ -0.26
CIITA-212ENST00000618207 ANKFY1Q9P2R3 1169 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms