RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 RIT2Q99578 217 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 PDCD2LQ9BRP1 358 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 UNC45AQ9H3U1 944 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 PDE11AQ9HCR9 933 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 ATP8A1Q9Y2Q0 1164 aa10.87□□□□□ -0.67
SMARCA1-205ENST00000617310 KNDC1Q76NI1 1749 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 FTLP02792 175 aaPredicted RBP10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 YY1P25490 414 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 ALDH3A1P30838 453 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 PDE1BQ01064 536 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 MTF1Q14872 753 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 IER5Q5VY09 327 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 CCDC121Q6ZUS5 278 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 MYRIPQ8NFW9 859 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 SLC30A5Q8TAD4 765 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 AFAP1L1Q8TED9 768 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 SCYL1Q96KG9 808 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 ASCC2Q9H1I8 757 aaPredicted RBP10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 ZBED1O96006 694 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 VTNP04004 478 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 RGS2P41220 211 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 OR1G1P47890 313 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 ORC2Q13416 577 aaPredicted RBP10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 TTC7AQ9ULT0 858 aaPredicted RBP10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 MED24O75448 989 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 GRAP2O75791 330 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 FGGP02679 453 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 WEE2P0C1S8 567 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 ZNF286BP0CG31 522 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 ATP5DP30049 168 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 CYP2C19P33261 490 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 IFNAR2P48551 515 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 SETDB1Q15047 1291 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 SNRNP35Q16560 246 aaKnown RBP10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 AMHR2Q16671 573 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 SHROOM1Q2M3G4 852 aaPredicted RBP10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 ARHGEF18Q6ZSZ5 1173 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 RNF180Q86T96 592 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 GRK7Q8WTQ7 553 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 CLMNQ96JQ2 1002 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 PURBQ96QR8 312 aaKnown RBP10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 ABHD10Q9NUJ1 306 aa10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 CHORDC1Q9UHD1 332 aaPredicted RBP10.86□□□□□ -0.67
SMARCA1-205ENST00000617310 TADA2AO75478 443 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 HMBSP08397 361 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 LCP1P13796 627 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 SDC4P31431 198 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 MXD4Q14582 209 aaPredicted RBP10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 LY6KQ17RY6 165 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 TTC30BQ8N4P2 665 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 SUDS3Q9H7L9 328 aaPredicted RBP10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 TBK1Q9UHD2 729 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 TRIM17Q9Y577 477 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 UBR1Q8IWV7 1749 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 HBP1O60381 514 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 PALMO75781 387 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 RHBDL3P58872 404 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 TAOK1Q7L7X3 1001 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 SLC51AQ86UW1 340 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 PARD3BQ8TEW8 1205 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 PPP4R1Q8TF05 950 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 TRAPPC12Q8WVT3 735 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 FAM81BQ96LP2 452 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 RUSC1Q9BVN2 902 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 ZNF142P52746 1687 aaPredicted RBP10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 ATP8B3O60423 1300 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 ESYT2A0FGR8 921 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 DPYSL4O14531 572 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 ZRANB2O95218 330 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 STX2P32856 288 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 LAMC2Q13753 1193 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 NCOA4Q13772 614 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 C1orf228Q6PIY5 440 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 GLB1LQ6UWU2 654 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 CCDC170Q8IYT3 715 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 MICALL1Q8N3F8 863 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 ATP2A3Q93084 1043 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 EHD4Q9H223 541 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 CEP72Q9P209 647 aa10.85□□□□□ -0.67
SMARCA1-205ENST00000617310 C3P01024 1663 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 TBX3O15119 743 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 MAGEB2O15479 319 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 NCK2O43639 380 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 PNMA6AP0CW24 399 aaPredicted RBP10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 PLS3P13797 630 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 SLC9A1P19634 815 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 GCLCP48506 637 aaPredicted RBP10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 ATF7IP2Q5U623 682 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 CEP128Q6ZU80 1094 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 SMAP1Q8IYB5 467 aaPredicted RBP10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 BHMTQ93088 406 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 RPGRIP1Q96KN7 1286 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 KATNAL1Q9BW62 490 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 PPP1R12CQ9BZL4 782 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 KLHL11Q9NVR0 708 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 SALL3Q9BXA9 1300 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 GOLGA8CPA6NN73 597 aa10.84□□□□□ -0.67
SMARCA1-205ENST00000617310 KLRC1P26715 233 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms