RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TEX12Q9BXU0 123 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 ADGRA2Q96PE1 1338 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 PRR5-ARHGAP8B1AHC4 643 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 RXRAP19793 462 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 RBMS1P29558 406 aaKnown RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 ATP5DP30049 168 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 LZICQ8WZA0 190 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 APPBP2Q92624 585 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 TRIM54Q9BYV2 358 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 LMAN2LQ9H0V9 348 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 KIAA1586Q9HCI6 787 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 TUBGCP6Q96RT7 1819 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 TBKBP1A7MCY6 615 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 CTNND1O60716 968 aaKnown RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 PSIP1O75475 530 aaKnown RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 THPOP40225 353 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 LAMC2Q13753 1193 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 CCDC184Q52MB2 194 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 TDRD10Q5VZ19 366 aaKnown RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 TAX1BP1Q86VP1 789 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 ARHGEF26Q96DR7 871 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 PHF20Q9BVI0 1012 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 KDM4CQ9H3R0 1056 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 TDRD3Q9H7E2 651 aaKnown RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 MYH15Q9Y2K3 1946 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 GPR25O00155 361 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 CTSHP09668 335 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 TNIP3Q96KP6 325 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 MIR1-1HGQ9H1L0 117 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.6□□□□□ -1.83
LPP-220ENST00000617246 CD4P01730 458 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 SF3B4Q15427 424 aaKnown RBP eCLIP3.6□□□□□ -1.83
LPP-220ENST00000617246 SFMBT1Q9UHJ3 866 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 ZNF646O15015 1829 aaPredicted RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 BRCA1P38398 1863 aaKnown RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 ESRRAP11474 423 aaPredicted RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 HTR1BP28222 390 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 NOTUMQ6P988 496 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 PAQR7Q86WK9 346 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 SAMD3Q8N6K7 520 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 MCCC2Q9HCC0 563 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 MAN2B1O00754 1011 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 PMPCBO75439 489 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 GJC1P36383 396 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 ERVK-9P63128 1117 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 ERVK-24P63145 666 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 LLGL2Q6P1M3 1020 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 HCAR2Q8TDS4 363 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 CEP170P1Q96L14 293 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 SAP130Q9H0E3 1048 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 PDE2AO00408 941 aaPredicted RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 ALDH3A1P30838 453 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 ATICP31939 592 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 CCDC85BQ15834 202 aaPredicted RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 FAM83AQ86UY5 434 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 SRRM1Q8IYB3 904 aaKnown RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 SYTL1Q8IYJ3 562 aa3.6□□□□□ -1.83
LPP-220ENST00000617246 MSL3Q8N5Y2 521 aaKnown RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 FAM160A2Q8N612 972 aaPredicted RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 STMN4Q9H169 189 aaPredicted RBP3.6□□□□□ -1.83
LPP-220ENST00000617246 ARHGAP10A1A4S6 786 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 PAFAH1B1P43034 410 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 BLKP51451 505 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 CLCN6P51797 869 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 MGAT5BQ3V5L5 792 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 LONRF3Q496Y0 759 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 RRAGBQ5VZM2 374 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 METTL3Q86U44 580 aaKnown RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 CAMK1DQ8IU85 385 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 BANK1Q8NDB2 785 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 AASDHPPTQ9NRN7 309 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ROBO2Q9HCK4 1378 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ITGB6P18564 788 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ERCC3P19447 782 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ETFBP38117 255 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 HARS2P49590 506 aaKnown RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 SPP2Q13103 211 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ALG11Q2TAA5 492 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ZNF366Q8N895 744 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 SPIRE2Q8WWL2 714 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 GPKOWQ92917 476 aaPredicted RBP eCLIP3.59□□□□□ -1.83
LPP-220ENST00000617246 IQCDQ96DY2 449 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 SEPT5Q99719 369 aaPredicted RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 DNPEPQ9ULA0 475 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 UMODL1Q5DID0 1318 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ZNF263O14978 683 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ZNF445P59923 1031 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ARNTL2Q8WYA1 636 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 TIGD1Q96MW7 591 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 SMC6Q96SB8 1091 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 NUP58Q9BVL2 599 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 BAZ2AQ9UIF9 1905 aaKnown RBP3.59□□□□□ -1.83
LPP-220ENST00000617246 CCDC151A5D8V7 595 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 ZNF839A8K0R7 811 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 IRF1P10914 325 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 GAP43P17677 238 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 PCSK1P29120 753 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 AP3M2P53677 418 aa3.59□□□□□ -1.83
LPP-220ENST00000617246 KIAA0753Q2KHM9 967 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms