RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 METTL13Q8N6R0 699 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 ZNF579Q8NAF0 562 aaKnown RBP16.51■□□□□ 0.23
UBXN1-218ENST00000616865 MRPS27Q92552 414 aaKnown RBP16.51■□□□□ 0.23
UBXN1-218ENST00000616865 CALML4Q96GE6 196 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 DYDC2Q96IM9 177 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 PRRX2Q99811 253 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 TCF25Q9BQ70 676 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 TMEM117Q9H0C3 514 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 GABBR1Q9UBS5 961 aa16.51■□□□□ 0.23
UBXN1-218ENST00000616865 PP2D1A8MPX8 630 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 HOXA2O43364 376 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 P4HBP07237 508 aaKnown RBP16.5■□□□□ 0.23
UBXN1-218ENST00000616865 CLCN3P51790 818 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 CYP4A11Q02928 519 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 SIGLEC14Q08ET2 396 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 ANKRD54Q6NXT1 300 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 B3GNT9Q6UX72 402 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 CLEC17AQ6ZS10 378 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 TRMT1LQ7Z2T5 733 aaKnown RBP16.5■□□□□ 0.23
UBXN1-218ENST00000616865 TPH2Q8IWU9 490 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 FBXL6Q8N531 539 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 CASD1Q96PB1 797 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 PHOX2BQ99453 314 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 ENTPD7Q9NQZ7 604 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 RNF19AQ9NV58 838 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 CCDC39Q9UFE4 941 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 USP34Q70CQ2 3546 aa16.5■□□□□ 0.23
UBXN1-218ENST00000616865 PRPF40AO75400 957 aaKnown RBP16.49■□□□□ 0.23
UBXN1-218ENST00000616865 CDC25AP30304 524 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 PPM1AP35813 382 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 QARSP47897 775 aaKnown RBP16.49■□□□□ 0.23
UBXN1-218ENST00000616865 PSMC5P62195 406 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 CTTNQ14247 550 aaKnown RBP16.49■□□□□ 0.23
UBXN1-218ENST00000616865 ADALQ6DHV7 355 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 KCNT2Q6UVM3 1135 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 LRRC55Q6ZSA7 311 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 LINC01465Q8N7H1 131 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 ASIC4Q96FT7 647 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 FAM167AQ96KS9 214 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 CCDC43Q96MW1 224 aaKnown RBP16.49■□□□□ 0.23
UBXN1-218ENST00000616865 MAP7D2Q96T17 732 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 POLR3CQ9BUI4 534 aaPredicted RBP16.49■□□□□ 0.23
UBXN1-218ENST00000616865 S1PR5Q9H228 398 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 TUFT1Q9NNX1 390 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 RGL1Q9NZL6 768 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 PUF60Q9UHX1 559 aaKnown RBP16.49■□□□□ 0.23
UBXN1-218ENST00000616865 AKT3Q9Y243 479 aa16.49■□□□□ 0.23
UBXN1-218ENST00000616865 HIDE1A8MVS5 230 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 MAGEB2O15479 319 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 SLC26A4O43511 780 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 RPA1P27694 616 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 NLRP11P59045 1033 aaKnown RBP16.48■□□□□ 0.23
UBXN1-218ENST00000616865 TCF15Q12870 199 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 PTPN21Q16825 1174 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 AXDND1Q5T1B0 1012 aaPredicted RBP16.48■□□□□ 0.23
UBXN1-218ENST00000616865 SYCE2Q6PIF2 218 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 ABI1Q8IZP0 508 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 FSIP1Q8NA03 581 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 EPSTI1Q96J88 318 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 ZNF558Q96NG5 402 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 LXNQ9BS40 222 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 NT5C3AQ9H0P0 336 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 ZSWIM4Q9H7M6 989 aa16.48■□□□□ 0.23
UBXN1-218ENST00000616865 NGRNQ9NPE2 291 aaKnown RBP16.48■□□□□ 0.23
UBXN1-218ENST00000616865 OATP04181 439 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 ZSCAN20P17040 1043 aaPredicted RBP16.47■□□□□ 0.23
UBXN1-218ENST00000616865 EIF4BP23588 611 aaKnown RBP16.47■□□□□ 0.23
UBXN1-218ENST00000616865 CMA1P23946 247 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 TMOD1P28289 359 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 PBX3P40426 434 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 RESP18Q5W5W9 173 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 EFCAB12Q6NXP0 572 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 LLGL2Q6P1M3 1020 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 SHC4Q6S5L8 630 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 CCDC73Q6ZRK6 1079 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 ECHDC2Q86YB7 292 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 ZNF710Q8N1W2 664 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 LRRC71Q8N4P6 559 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 TMEM87AQ8NBN3 555 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 PLIN2Q99541 437 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 APOL5Q9BWW9 433 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 CCSER1Q9C0I3 900 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 ADAMTS10Q9H324 1103 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 NRBP2Q9NSY0 501 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 KIAA1024Q9UPX6 916 aa16.47■□□□□ 0.23
UBXN1-218ENST00000616865 A0A1W2PQ27 194 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 A0A1W2PQ64 194 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 A0A1W2PQD8 194 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 DDX11L8A8MPP1 907 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 MED24O75448 989 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 SLITRK3O94933 977 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 HOXB8P17481 243 aaPredicted RBP16.46■□□□□ 0.23
UBXN1-218ENST00000616865 MUTP22033 750 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 VCPP55072 806 aaKnown RBP16.46■□□□□ 0.23
UBXN1-218ENST00000616865 PRKCEQ02156 737 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 KRT17Q04695 432 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 UGCGQ16739 394 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 CLLU1OSQ5K130 101 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 RRAGBQ5VZM2 374 aa16.46■□□□□ 0.23
UBXN1-218ENST00000616865 POTEGQ6S5H5 508 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms