RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 SUPT20HL2P0C7V6 817 aa16.91■□□□□ 0.3
SEMA3B-212ENST00000616701 ATP4AP20648 1035 aa16.91■□□□□ 0.3
SEMA3B-212ENST00000616701 PLA2G4AP47712 749 aa16.91■□□□□ 0.3
SEMA3B-212ENST00000616701 SMTNP53814 917 aa16.91■□□□□ 0.3
SEMA3B-212ENST00000616701 TUBB2AQ13885 445 aa16.91■□□□□ 0.3
SEMA3B-212ENST00000616701 PHLDB3Q6NSJ2 640 aa16.91■□□□□ 0.3
SEMA3B-212ENST00000616701 MIS18BP1Q6P0N0 1132 aa16.91■□□□□ 0.3
SEMA3B-212ENST00000616701 CDHR1Q96JP9 859 aa16.91■□□□□ 0.3
SEMA3B-212ENST00000616701 NOX5Q96PH1 765 aa16.91■□□□□ 0.3
SEMA3B-212ENST00000616701 ALS2CR12Q96Q35 445 aa16.91■□□□□ 0.3
SEMA3B-212ENST00000616701 TUBB2BQ9BVA1 445 aa16.91■□□□□ 0.3
SEMA3B-212ENST00000616701 POLR3FQ9H1D9 316 aaPredicted RBP16.91■□□□□ 0.3
SEMA3B-212ENST00000616701 MYPNQ86TC9 1320 aa16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 PALMO75781 387 aa16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 EPHX2P34913 555 aa16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 C2orf54Q08AI8 447 aa16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 RIOX2Q8IUF8 465 aa16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 SLC9A9Q8IVB4 645 aa16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 TOPORSQ9NS56 1045 aaPredicted RBP16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 A0A0G2JLL6 359 aaPredicted RBP16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 EIF3JO75822 258 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 MAPTP10636 758 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 CNGA1P29973 690 aa16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 MATR3P43243 847 aaKnown RBP eCLIP16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 MKRN3Q13064 507 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 C1orf220Q5T0J3 134 aa16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 PRRT2Q7Z6L0 340 aaPredicted RBP16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 ERO1BQ86YB8 467 aa16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 RDM1Q8NG50 284 aa16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 U2AF1L4Q8WU68 220 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 OPTNQ96CV9 577 aa16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 SEPT11Q9NVA2 429 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-212ENST00000616701 GTPBP10A4D1E9 387 aaKnown RBP16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 F8VZ95 297 aa16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 UBA1P22314 1058 aaKnown RBP16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 STAT1P42224 750 aa16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 LY6KQ17RY6 165 aa16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 SRLQ86TD4 932 aa16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 ARHGEF19Q8IW93 802 aa16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 ANKRD13AQ8IZ07 590 aa16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 TXLNBQ8N3L3 684 aa16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 KAT5Q92993 513 aa16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 MED4Q9NPJ6 270 aa16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 ZNF302Q9NR11 478 aa16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 SNX12Q9UMY4 172 aa16.89■□□□□ 0.3
SEMA3B-212ENST00000616701 NFASCO94856 1347 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 ZMYND10O75800 440 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 CNMDO75829 334 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 PPATQ06203 517 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 ALCAMQ13740 583 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 TTC19Q6DKK2 380 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 DPY19L2Q6NUT2 758 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 CC2D1AQ6P1N0 951 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 SLC39A4Q6P5W5 647 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 ALKBH5Q6P6C2 394 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 BICD1Q96G01 975 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 UBE2TQ9NPD8 197 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 NAGPAQ9UK23 515 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 KIF1CO43896 1103 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 NF2P35240 595 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 POLGP54098 1239 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 INTS8Q75QN2 995 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 IWS1Q96ST2 819 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 GPR88Q9GZN0 384 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 ATP6V0A4Q9HBG4 840 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 ZCCHC17Q9NP64 241 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 APEX2Q9UBZ4 518 aa16.89■□□□□ 0.29
SEMA3B-212ENST00000616701 SYNGAP1Q96PV0 1343 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 MYH9P35579 1960 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 ANO9A1A5B4 782 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 DDX3XO00571 662 aaKnown RBP eCLIP16.88■□□□□ 0.291e-8■□□□□ 10.9
SEMA3B-212ENST00000616701 SOX5P35711 763 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 USP8P40818 1118 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 RNASE9P60153 205 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 VSNL1P62760 191 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 SNRNP35Q16560 246 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 GLYCTKQ8IVS8 523 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 DNERQ8NFT8 737 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 POMGNT1Q8WZA1 660 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 MS4A14Q96JA4 679 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 OSBPL9Q96SU4 736 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 SUGCTQ9HAC7 445 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 FOXN3O00409 490 aaPredicted RBP16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 HNRNPDLO14979 420 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 DGAT1O75907 488 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 MARK3P27448 753 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 NAB2Q15742 525 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 LMO3Q8TAP4 145 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 LNX1Q8TBB1 728 aaPredicted RBP16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 KIFAP3Q92845 792 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 TIPINQ9BVW5 301 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 TLR10Q9BXR5 811 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 STK33Q9BYT3 514 aa16.88■□□□□ 0.29
SEMA3B-212ENST00000616701 SASH3O75995 380 aa16.87■□□□□ 0.29
SEMA3B-212ENST00000616701 EMC2Q15006 297 aa16.87■□□□□ 0.29
SEMA3B-212ENST00000616701 TMEM63BQ5T3F8 832 aa16.87■□□□□ 0.29
SEMA3B-212ENST00000616701 MAP4K3Q8IVH8 894 aa16.87■□□□□ 0.29
SEMA3B-212ENST00000616701 LUC7LQ9NQ29 371 aaKnown RBP16.87■□□□□ 0.29
SEMA3B-212ENST00000616701 SPDYE5A6NIY4 337 aa16.87■□□□□ 0.29
SEMA3B-212ENST00000616701 POTEJP0CG39 1038 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms