RNA–Protein interactions for RNA: ENST00000616430.1

PCDHGB6-202, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB6, Length 4,601 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-202ENST00000616430 PALM3A6NDB9 673 aaPredicted RBP11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 SSTR3P32745 418 aaPredicted RBP11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 COPB2P35606 906 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 CDO1Q16878 200 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 KLHDC7AQ5VTJ3 777 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 LRIG3Q6UXM1 1119 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 TRIM42Q8IWZ5 723 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 CCNYQ8ND76 341 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 SLC30A5Q8TAD4 765 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 KCNV2Q8TDN2 545 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 MASTLQ96GX5 879 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 RBM41Q96IZ5 413 aaKnown RBP11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 HAUS2Q9NVX0 235 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 GIPC1O14908 333 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 TLR3O15455 904 aaKnown RBP11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 DCTN3O75935 186 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 MRPS9P82933 396 aaKnown RBP11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 CAV1Q03135 178 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 EPHA7Q15375 998 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 DAGLBQ8NCG7 672 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 TMEM35BQ8NCS4 154 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 HSPH1Q92598 858 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 PRMT1Q99873 361 aaKnown RBP11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 MED10Q9BTT4 135 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 APOL6Q9BWW8 343 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 ADAM33Q9BZ11 813 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 ISCUQ9H1K1 167 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 NGRNQ9NPE2 291 aaKnown RBP11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 TBC1D22BQ9NU19 505 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 DBR1Q9UK59 544 aaKnown RBP11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 MAGED2Q9UNF1 606 aaPredicted RBP11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 A0A0U1RQJ8 604 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 TCP11X1B4DZS4 312 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 SLC16A3O15427 465 aaKnown RBP11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 PRPSAP2O60256 369 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 NDUFB10O96000 172 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 JAK3P52333 1124 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 GPS1Q13098 491 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 TFDP1Q14186 410 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 FBXL13Q8NEE6 735 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 MCPH1Q8NEM0 835 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 CASKIN2Q8WXE0 1202 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 INTS13Q9NVM9 706 aa11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 CHORDC1Q9UHD1 332 aaPredicted RBP11.6□□□□□ -0.55
PCDHGB6-202ENST00000616430 SPAG7O75391 227 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 RFX1P22670 979 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 KCNJ1P48048 391 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 ARL4CP56559 192 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 LMBRD2Q68DH5 695 aaPredicted RBP11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 LRRC37BQ96QE4 947 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 PACSIN1Q9BY11 444 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 IFT122Q9HBG6 1241 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 SMYD2Q9NRG4 433 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 NAGPAQ9UK23 515 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 ESYT2A0FGR8 921 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 CLDN3O15551 220 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 MED7O43513 233 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 RTN2O75298 545 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 ZBED1O96006 694 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 SCP2P22307 547 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 FIGNQ5HY92 759 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 IZUMO3Q5VZ72 239 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 SLFN12LQ6IEE8 588 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 CENPPQ6IPU0 288 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 SYT2Q8N9I0 419 aaPredicted RBP11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 LINC00116Q8NCU8 138 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 CYFIP2Q96F07 1278 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 SNF8Q96H20 258 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 SEC16BQ96JE7 1060 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 XPO6Q96QU8 1125 aaKnown RBP11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 PPP1R16BQ96T49 567 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 TRIM55Q9BYV6 548 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 ECT2Q9H8V3 914 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 RAB21Q9UL25 225 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 IQANK1A0A1B0GTG1 560 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 EIF4E1BA6NMX2 242 aaKnown RBP11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 MDM2Q00987 491 aaPredicted RBP11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 PTGISQ16647 500 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 JAMLQ86YT9 394 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 MORC4Q8TE76 937 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 SYN2Q92777 582 aaPredicted RBP11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 DDX23Q9BUQ8 820 aaKnown RBP11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 ALG6Q9Y672 507 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 IFT172Q9UG01 1749 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 CASQ2O14958 399 aaPredicted RBP11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 ECE2O60344 883 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 SKIP12755 728 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 MARK3P27448 753 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 HSD17B3P37058 310 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 GARSP41250 739 aaKnown RBP11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 LONRF1Q17RB8 773 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 GABBR1Q9UBS5 961 aa11.59□□□□□ -0.55
PCDHGB6-202ENST00000616430 C21orf2O43822 256 aa11.58□□□□□ -0.56
PCDHGB6-202ENST00000616430 ANXA13P27216 316 aa11.58□□□□□ -0.56
PCDHGB6-202ENST00000616430 RPA1P27694 616 aa11.58□□□□□ -0.56
PCDHGB6-202ENST00000616430 ASPHQ12797 758 aa11.58□□□□□ -0.56
PCDHGB6-202ENST00000616430 ARHGAP27Q6ZUM4 889 aa11.58□□□□□ -0.56
PCDHGB6-202ENST00000616430 PDZD4Q76G19 769 aaPredicted RBP11.58□□□□□ -0.56
PCDHGB6-202ENST00000616430 TXNRD3Q86VQ6 643 aa11.58□□□□□ -0.56
PCDHGB6-202ENST00000616430 RHOT1Q8IXI2 618 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms