RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ADAMTS7Q9UKP4 1686 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 DPPA5A6NC42 116 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 FAM196BA6NMK8 535 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 CCND1P24385 295 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 ZNF131P52739 623 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 UBXN2AP68543 259 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 ARSHQ5FYA8 562 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.14□□□□□ -0.15
MSH6-214ENST00000616033 RFFLQ8WZ73 363 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 RUSC1Q9BVN2 902 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 KCNQ5Q9NR82 932 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 CASZ1Q86V15 1759 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 PFASO15067 1338 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 EDIL3O43854 480 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 ENTPD5O75356 428 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 CBX6O95503 412 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 AGTP01019 485 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 CHKAP35790 457 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 MPP2Q14168 576 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 PARP10Q53GL7 1025 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 FAM186BQ8IYM0 893 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 PRELID2Q8N945 189 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 TTC8Q8TAM2 541 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 DTX3LQ8TDB6 740 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 NUDCD1Q96RS6 583 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 TSC22D3Q99576 134 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 TAOK3Q9H2K8 898 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 SLCO1B3Q9NPD5 702 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 NKIRAS1Q9NYS0 192 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 PKD2L1Q9P0L9 805 aa14.14□□□□□ -0.15
MSH6-214ENST00000616033 CLDN3O15551 220 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 PYGMP11217 842 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 COMTP21964 271 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 TUBP50607 506 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 SLC30A9Q6PML9 568 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 MAGEC3Q8TD91 643 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 SPZ1Q9BXG8 430 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 TRIM7Q9C029 511 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 DHX36Q9H2U1 1008 aaKnown RBP14.13□□□□□ -0.15
MSH6-214ENST00000616033 ALG13Q9NP73 1137 aaKnown RBP14.13□□□□□ -0.15
MSH6-214ENST00000616033 SLC5A4Q9NY91 659 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 DNM3Q9UQ16 869 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 SUGT1Q9Y2Z0 365 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 GLI3P10071 1580 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 DDX3YO15523 660 aaKnown RBP14.13□□□□□ -0.15
MSH6-214ENST00000616033 ZNF76P36508 570 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 ZNF268Q14587 947 aaPredicted RBP14.13□□□□□ -0.15
MSH6-214ENST00000616033 SBK1Q52WX2 424 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 FBXO33Q7Z6M2 555 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 ZDHHC14Q8IZN3 488 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 SYCP3Q8IZU3 236 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 CYP4X1Q8N118 509 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 TIAM2Q8IVF5 1701 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 ABCB11O95342 1321 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 SRRM3A6NNA2 597 aaPredicted RBP14.13□□□□□ -0.15
MSH6-214ENST00000616033 FOXN3O00409 490 aaPredicted RBP14.13□□□□□ -0.15
MSH6-214ENST00000616033 MAP3K13O43283 966 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 MUM1Q2TAK8 710 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 C10orf76Q5T2E6 689 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 MFSD4BQ5TF39 518 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 TPH2Q8IWU9 490 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 ADGRF4Q8IZF3 695 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 SLC35C1Q96A29 364 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 NAP1L3Q99457 506 aaPredicted RBP14.13□□□□□ -0.15
MSH6-214ENST00000616033 UBE2TQ9NPD8 197 aaPredicted RBP14.13□□□□□ -0.15
MSH6-214ENST00000616033 GRHL1Q9NZI5 618 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 DLGAP2Q9P1A6 1054 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 DCTN4Q9UJW0 460 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 STXBP5LQ9Y2K9 1186 aa14.13□□□□□ -0.15
MSH6-214ENST00000616033 SPATA31A5Q5VU36 1347 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 SPATA31A7Q8IWB4 1347 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 CALUO43852 315 aaPredicted RBP14.12□□□□□ -0.15
MSH6-214ENST00000616033 SMNDC1O75940 238 aaKnown RBP eCLIP14.12□□□□□ -0.15
MSH6-214ENST00000616033 FERP16591 822 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 EPHB2P29323 1055 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 SSTR3P32745 418 aaPredicted RBP14.12□□□□□ -0.15
MSH6-214ENST00000616033 EPHA7Q15375 998 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 TMEM119Q4V9L6 283 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 CATSPER3Q86XQ3 398 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 UBL4BQ8N7F7 174 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 ITFG2Q969R8 447 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 PGM2Q96G03 612 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 CRAMP1Q96RY5 1269 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 NT5C3AQ9H0P0 336 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 ARL2BPQ9Y2Y0 163 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 PYGBP11216 843 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 PECAM1P16284 738 aaPredicted RBP14.12□□□□□ -0.15
MSH6-214ENST00000616033 POLD1P28340 1107 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 SOX5P35711 763 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 ADCY8P40145 1251 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 CBWD6Q4V339 395 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 CBWD3Q5JTY5 395 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 CBWD5Q5RIA9 395 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 FAM182AQ5T1J6 154 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 C4orf33Q8N1A6 199 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 RASGEF1CQ8N431 466 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 SLC30A5Q8TAD4 765 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 ZFATQ9P243 1243 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 FAM13AO94988 1023 aa14.12□□□□□ -0.15
MSH6-214ENST00000616033 GSTA1P08263 222 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms