RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 PLCB4Q15147 1175 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 FSCN1Q16658 493 aaKnown RBP12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 SLFN13Q68D06 897 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 CENPPQ6IPU0 288 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 KDM7AQ6ZMT4 941 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 CCDC91Q7Z6B0 441 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 IQCKQ8N0W5 287 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 CNPY4Q8N129 248 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 FAM133AQ8N9E0 248 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 BCAS4Q8TDM0 211 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 STAMQ92783 540 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 CNOT6LQ96LI5 555 aaKnown RBP12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 OSBPL9Q96SU4 736 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 UHRF1Q96T88 793 aaPredicted RBP12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 SEZ6LQ9BYH1 1024 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 GDF3Q9NR23 364 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 RNF146Q9NTX7 359 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 GNEQ9Y223 722 aaKnown RBP12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 B4DLN1 442 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 TSPY3P0CV98 308 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 TSPY8P0CW00 308 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 MYBL2P10244 700 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 ABL2P42684 1182 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 PMS1P54277 932 aaKnown RBP12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 CCL23P55773 120 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 GSCP56915 257 aaPredicted RBP12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 TAX1BP1Q86VP1 789 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 RPUSD2Q8IZ73 545 aaKnown RBP12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 MICALL1Q8N3F8 863 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 SLC43A3Q8NBI5 491 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 WHAMMQ8TF30 809 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 CHURC1Q8WUH1 139 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 RUFY1Q96T51 708 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 NOC4LQ9BVI4 516 aaKnown RBP12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 IFIH1Q9BYX4 1025 aaKnown RBP12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 LRRC27Q9C0I9 530 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 TCP11L1Q9NUJ3 509 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 AGPAT5Q9NUQ2 364 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 SIK3Q9Y2K2 1263 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 YBX2Q9Y2T7 364 aaKnown RBP12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 SLC4A7Q9Y6M7 1214 aa12.09□□□□□ -0.47
RABGAP1-213ENST00000616002 ASTN1O14525 1302 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 ATP8B3O60423 1300 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 UMODL1Q5DID0 1318 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 CCDC194A0A1B0GVG4 234 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 TRIM49BA6NDI0 452 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 SOWAHBA6NEL2 793 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 DYNC1LI2O43237 492 aaPredicted RBP12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 SMARCA1P28370 1054 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 MTIF2P46199 727 aaKnown RBP12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 PSEN1P49768 467 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 LRRC63Q05C16 580 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 PAK2Q13177 524 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 PSMD2Q13200 908 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 HIC1Q14526 733 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 MAN2A1Q16706 1144 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 ASTE1Q2TB18 679 aaPredicted RBP12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 CFAP221Q4G0U5 840 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 VWA3BQ502W6 1294 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 PPP2R2DQ66LE6 453 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 LRIG3Q6UXM1 1119 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 FAM160B2Q86V87 743 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 CAPZA3Q96KX2 299 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 AGBL1Q96MI9 1066 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 LRRC1Q9BTT6 524 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 TRIM9Q9C026 710 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 TRPV6Q9H1D0 765 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 NCOR1O75376 2440 aa12.08□□□□□ -0.48
RABGAP1-213ENST00000616002 GBF1Q92538 1859 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 ZBBXA8MT70 800 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 BTNL10A8MVZ5 291 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 HMGB1P1B2RPK0 211 aaPredicted RBP12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 ZNF263O14978 683 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 ALAS1P13196 640 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 SMPD1P17405 629 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 SLC1A4P43007 532 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 CCT5P48643 541 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 KIF11P52732 1056 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 GNGT1P63211 74 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 GRM4Q14833 912 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 CCDC96Q2M329 555 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 TKFCQ3LXA3 575 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 CCDC181Q5TID7 509 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 HAUS3Q68CZ6 603 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 ANKRD40Q6AI12 368 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 IQSEC1Q6DN90 963 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 PPP4R3AQ6IN85 833 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 EEPD1Q7L9B9 569 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 KRT25Q7Z3Z0 450 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 GUF1Q8N442 669 aaKnown RBP12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 EFCAB3Q8N7B9 438 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 NEDD1Q8NHV4 660 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 NOX5Q96PH1 765 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 MYCBPQ99417 103 aaPredicted RBP12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 EPN3Q9H201 632 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 STK17AQ9UEE5 414 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 LRWD1Q9UFC0 647 aa12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 DMGDHQ9UI17 866 aaKnown RBP12.07□□□□□ -0.48
RABGAP1-213ENST00000616002 PCDHB8Q9UN66 801 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms