RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 ITGB1P05556 798 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 BMP6P22004 513 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 DNAJB1P25685 340 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 STIM1Q13586 685 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 NCAPHQ15003 741 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 TPD52L1Q16890 204 aaPredicted RBP11.88□□□□□ -0.51
COL4A1-205ENST00000615732 NAALADL2Q58DX5 795 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 HERC4Q5GLZ8 1057 aaPredicted RBP11.88□□□□□ -0.51
COL4A1-205ENST00000615732 ZNF658Q5TYW1 1059 aaPredicted RBP11.88□□□□□ -0.51
COL4A1-205ENST00000615732 IER5Q5VY09 327 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 NCAPH2Q6IBW4 605 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 MTHFD1LQ6UB35 978 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 SV2BQ7L1I2 683 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 ADGRD2Q7Z7M1 963 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 RNF135Q8IUD6 432 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 NPAS4Q8IUM7 802 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 CCDC60Q8IWA6 550 aaPredicted RBP11.88□□□□□ -0.51
COL4A1-205ENST00000615732 ENOX1Q8TC92 643 aaKnown RBP11.88□□□□□ -0.51
COL4A1-205ENST00000615732 MRFAP1L1Q96HT8 127 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 FAM20AQ96MK3 541 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 POP1Q99575 1024 aaKnown RBP11.88□□□□□ -0.51
COL4A1-205ENST00000615732 MMTAG2Q9BU76 263 aaKnown RBP11.88□□□□□ -0.51
COL4A1-205ENST00000615732 CELF4Q9BZC1 486 aaKnown RBP11.88□□□□□ -0.51
COL4A1-205ENST00000615732 NT5C3AQ9H0P0 336 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 TMX1Q9H3N1 280 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 KCNMB3Q9NPA1 279 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 EXOC1Q9NV70 894 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 KBTBD4Q9NVX7 518 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 HCSTQ9UBK5 93 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 CD207Q9UJ71 328 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 CTNND2Q9UQB3 1225 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 PCDHA2Q9Y5H9 948 aa11.88□□□□□ -0.51
COL4A1-205ENST00000615732 TTC3P53804 2025 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 USP34Q70CQ2 3546 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 TECTAO75443 2155 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 FAM86B1E9PN63 330 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 MAFGO15525 162 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 SERPINC1P01008 464 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 FAM86B2P0C5J1 330 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 CDK11BP21127 795 aaKnown RBP11.87□□□□□ -0.51
COL4A1-205ENST00000615732 FANCCQ00597 558 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 SETQ01105 290 aaPredicted RBP11.87□□□□□ -0.51
COL4A1-205ENST00000615732 KRT76Q01546 638 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 NFX1Q12986 1120 aaKnown RBP11.87□□□□□ -0.51
COL4A1-205ENST00000615732 DHX8Q14562 1220 aaKnown RBP11.87□□□□□ -0.51
COL4A1-205ENST00000615732 KCNB1Q14721 858 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 TMEM119Q4V9L6 283 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 CMTR2Q8IYT2 770 aaKnown RBP11.87□□□□□ -0.51
COL4A1-205ENST00000615732 KLHL23Q8NBE8 558 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 ETNPPLQ8TBG4 499 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 TMEM40Q8WWA1 233 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 CRYGNQ8WXF5 182 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 LARP4BQ92615 738 aaKnown RBP11.87□□□□□ -0.51
COL4A1-205ENST00000615732 RAD54LQ92698 747 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 PNMA5Q96PV4 448 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 MTRQ99707 1265 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 C7orf25Q9BPX7 421 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 LRFN2Q9ULH4 789 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 PLAGL2Q9UPG8 496 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 ZKSCAN5Q9Y2L8 839 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 NFE2L3Q9Y4A8 694 aa11.87□□□□□ -0.51
COL4A1-205ENST00000615732 KAT6AQ92794 2004 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 MEIS1O00470 390 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 KLRC1P26715 233 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 NDUFV1P49821 464 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 PAK1Q13153 545 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 ADAM15Q13444 863 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 MCM6Q14566 821 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 KMT5BQ4FZB7 885 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 FAM160B1Q5W0V3 765 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 PLPPR4Q7Z2D5 763 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 CRIPAKQ8N1N5 446 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 P2RX5Q93086 422 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 GJA10Q969M2 543 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 MSLNLQ96KJ4 702 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 MFSD14AQ96MC6 490 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 PHOX2BQ99453 314 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 PLVAPQ9BX97 442 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 FTHL17Q9BXU8 183 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 TRIM9Q9C026 710 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 CLEC1BQ9P126 229 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 NOC2LQ9Y3T9 749 aaKnown RBP11.86□□□□□ -0.51
COL4A1-205ENST00000615732 PLXNA4Q9HCM2 1894 aa11.86□□□□□ -0.51
COL4A1-205ENST00000615732 IGLV3-22A0A075B6J6 115 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 SMIM35A0A1B0GVV1 85 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 ZBTB42B2RXF5 422 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 MSH4O15457 936 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 EYA4O95677 639 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 GLP2RO95838 553 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 VTNP04004 478 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 RPLP2P05387 115 aaKnown RBP11.85□□□□□ -0.51
COL4A1-205ENST00000615732 SSBP05455 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL4A1-205ENST00000615732 STAG3L1P0CL83 205 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 PPP1R2P41236 205 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 NRIP1P48552 1158 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 STX17P56962 302 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 UBASH3AP57075 661 aa11.85□□□□□ -0.51
COL4A1-205ENST00000615732 RBM10P98175 930 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms