RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 PEX3P56589 373 aa27.98■■■□□ 2.07
SURF1-205ENST00000615505 DMP1Q13316 513 aaPredicted RBP27.98■■■□□ 2.07
SURF1-205ENST00000615505 CLLU1OSQ5K130 101 aa27.98■■■□□ 2.07
SURF1-205ENST00000615505 UBXN11Q5T124 520 aa27.98■■■□□ 2.07
SURF1-205ENST00000615505 USP49Q70CQ1 688 aa27.98■■■□□ 2.07
SURF1-205ENST00000615505 DAW1Q8N136 415 aa27.98■■■□□ 2.07
SURF1-205ENST00000615505 RAD54LQ92698 747 aa27.98■■■□□ 2.07
SURF1-205ENST00000615505 BLOC1S4Q9NUP1 217 aa27.98■■■□□ 2.07
SURF1-205ENST00000615505 DAXXQ9UER7 740 aaPredicted RBP27.98■■■□□ 2.07
SURF1-205ENST00000615505 CFAP45Q9UL16 551 aa27.98■■■□□ 2.07
SURF1-205ENST00000615505 B4GALT5O43286 388 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 RAD51AP2Q09MP3 1159 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 MAPK7Q13164 816 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 DHX8Q14562 1220 aaKnown RBP27.97■■■□□ 2.07
SURF1-205ENST00000615505 PTPROQ16827 1216 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 TMEM132AQ24JP5 1023 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 NAALADL2Q58DX5 795 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 GLB1LQ6UWU2 654 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 MRPL10Q7Z7H8 261 aaKnown RBP27.97■■■□□ 2.07
SURF1-205ENST00000615505 LRRC43Q8N309 656 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 MICALL1Q8N3F8 863 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 HELQQ8TDG4 1101 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 PPM1EQ8WY54 764 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 LPPQ93052 612 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 MRPL9Q9BYD2 267 aaKnown RBP27.97■■■□□ 2.07
SURF1-205ENST00000615505 TRIM6Q9C030 488 aaPredicted RBP27.97■■■□□ 2.07
SURF1-205ENST00000615505 PCDHB12Q9Y5F1 795 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 RALGAPA2Q2PPJ7 1873 aa27.97■■■□□ 2.07
SURF1-205ENST00000615505 FNDC1Q4ZHG4 1894 aaPredicted RBP27.96■■■□□ 2.07
SURF1-205ENST00000615505 A0A1B0GUA9 196 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 PRKCBP05771 671 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 LIG1P18858 919 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 DDIT3P35638 169 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 NPTX2P47972 431 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 PRPF4BQ13523 1007 aaKnown RBP27.96■■■□□ 2.07
SURF1-205ENST00000615505 LONRF3Q496Y0 759 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 RRAGBQ5VZM2 374 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 GPBP1Q86WP2 473 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 LARP4BQ92615 738 aaKnown RBP27.96■■■□□ 2.07
SURF1-205ENST00000615505 P2RX5Q93086 422 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 KIFC3Q9BVG8 833 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 KMT5AQ9NQR1 393 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 STK17AQ9UEE5 414 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 RBM19Q9Y4C8 960 aaKnown RBP27.96■■■□□ 2.07
SURF1-205ENST00000615505 MYH15Q9Y2K3 1946 aa27.96■■■□□ 2.07
SURF1-205ENST00000615505 NLRC5Q86WI3 1866 aa27.95■■■□□ 2.07
SURF1-205ENST00000615505 SFI1A8K8P3 1242 aa27.95■■■□□ 2.06
SURF1-205ENST00000615505 K7ERI5 159 aa27.95■■■□□ 2.06
SURF1-205ENST00000615505 ACKR2O00590 384 aa27.95■■■□□ 2.06
SURF1-205ENST00000615505 BRD1O95696 1058 aa27.95■■■□□ 2.06
SURF1-205ENST00000615505 NCLP19338 710 aaKnown RBP27.95■■■□□ 2.06
SURF1-205ENST00000615505 MCM6Q14566 821 aa27.95■■■□□ 2.06
SURF1-205ENST00000615505 CCDC85BQ15834 202 aaPredicted RBP27.95■■■□□ 2.06
SURF1-205ENST00000615505 SLC27A1Q6PCB7 646 aa27.95■■■□□ 2.06
SURF1-205ENST00000615505 HACE1Q8IYU2 909 aa27.95■■■□□ 2.06
SURF1-205ENST00000615505 KCNG4Q8TDN1 519 aa27.95■■■□□ 2.06
SURF1-205ENST00000615505 EIF2AQ9BY44 585 aaKnown RBP27.95■■■□□ 2.06
SURF1-205ENST00000615505 CCDC113Q9H0I3 377 aa27.95■■■□□ 2.06
SURF1-205ENST00000615505 PHLPP2Q6ZVD8 1323 aa27.94■■■□□ 2.06
SURF1-205ENST00000615505 CNTNAP2Q9UHC6 1331 aa27.94■■■□□ 2.06
SURF1-205ENST00000615505 PLS3P13797 630 aa27.94■■■□□ 2.06
SURF1-205ENST00000615505 LAG3P18627 525 aa27.94■■■□□ 2.06
SURF1-205ENST00000615505 SMTNP53814 917 aa27.94■■■□□ 2.06
SURF1-205ENST00000615505 CSPP1Q1MSJ5 1256 aa27.94■■■□□ 2.06
SURF1-205ENST00000615505 ARSHQ5FYA8 562 aa27.94■■■□□ 2.06
SURF1-205ENST00000615505 LRRC15Q8TF66 581 aa27.94■■■□□ 2.06
SURF1-205ENST00000615505 MRPL38Q96DV4 380 aaKnown RBP27.94■■■□□ 2.06
SURF1-205ENST00000615505 CWH43Q9H720 699 aa27.94■■■□□ 2.06
SURF1-205ENST00000615505 UBN1Q9NPG3 1134 aa27.94■■■□□ 2.06
SURF1-205ENST00000615505 ODF2LQ9ULJ1 636 aa27.94■■■□□ 2.06
SURF1-205ENST00000615505 IPPQ9Y573 584 aa27.94■■■□□ 2.06
SURF1-205ENST00000615505 N4BP3O15049 544 aa27.93■■■□□ 2.06
SURF1-205ENST00000615505 KRT18P05783 430 aaKnown RBP27.93■■■□□ 2.06
SURF1-205ENST00000615505 ITGA4P13612 1032 aa27.93■■■□□ 2.06
SURF1-205ENST00000615505 DNM1Q05193 864 aaKnown RBP27.93■■■□□ 2.06
SURF1-205ENST00000615505 AGMOQ6ZNB7 445 aa27.93■■■□□ 2.06
SURF1-205ENST00000615505 CCDC73Q6ZRK6 1079 aa27.93■■■□□ 2.06
SURF1-205ENST00000615505 LRRC55Q6ZSA7 311 aa27.93■■■□□ 2.06
SURF1-205ENST00000615505 SMG8Q8ND04 991 aaKnown RBP27.93■■■□□ 2.06
SURF1-205ENST00000615505 SPIRE2Q8WWL2 714 aa27.93■■■□□ 2.06
SURF1-205ENST00000615505 NTPCRQ9BSD7 190 aaKnown RBP27.93■■■□□ 2.06
SURF1-205ENST00000615505 LMAN2LQ9H0V9 348 aa27.93■■■□□ 2.06
SURF1-205ENST00000615505 TMEM134Q9H6X4 195 aa27.93■■■□□ 2.06
SURF1-205ENST00000615505 RSAD1Q9HA92 442 aa27.93■■■□□ 2.06
SURF1-205ENST00000615505 LARSQ9P2J5 1176 aaKnown RBP27.93■■■□□ 2.06
SURF1-205ENST00000615505 COL4A4P53420 1690 aaPredicted RBP27.93■■■□□ 2.06
SURF1-205ENST00000615505 NPHP3-ACAD11A0A0J9YXS1 232 aa27.92■■■□□ 2.06
SURF1-205ENST00000615505 MEIS3P2A8K0S8 358 aa27.92■■■□□ 2.06
SURF1-205ENST00000615505 CUTAO60888 179 aa27.92■■■□□ 2.06
SURF1-205ENST00000615505 OFD1O75665 1012 aa27.92■■■□□ 2.06
SURF1-205ENST00000615505 NOMO2Q5JPE7 1267 aa27.92■■■□□ 2.06
SURF1-205ENST00000615505 CDR2LQ86X02 465 aaPredicted RBP27.92■■■□□ 2.06
SURF1-205ENST00000615505 KLHL23Q8NBE8 558 aa27.92■■■□□ 2.06
SURF1-205ENST00000615505 COLGALT1Q8NBJ5 622 aa27.92■■■□□ 2.06
SURF1-205ENST00000615505 URGCPQ8TCY9 931 aa27.92■■■□□ 2.06
SURF1-205ENST00000615505 ARHGAP28Q9P2N2 729 aa27.92■■■□□ 2.06
SURF1-205ENST00000615505 PLAGL2Q9UPG8 496 aa27.92■■■□□ 2.06
SURF1-205ENST00000615505 INPP5FQ9Y2H2 1132 aa27.92■■■□□ 2.06
SURF1-205ENST00000615505 TRANK1O15050 2925 aa27.91■■■□□ 2.06
SURF1-205ENST00000615505 PRRC2BQ5JSZ5 2229 aaKnown RBP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms