RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 OFD1O75665 1012 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 SPATA31C1P0DKV0 1188 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 COL9A1P20849 921 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 ARL2P36404 184 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 TECP42680 631 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 CAPSQ13938 189 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 SMC1AQ14683 1233 aaKnown RBP25.26■■□□□ 1.63
FAM228B-208ENST00000613899 NOTUMQ6P988 496 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 MRPL10Q7Z7H8 261 aaKnown RBP25.26■■□□□ 1.63
FAM228B-208ENST00000613899 CATSPER3Q86XQ3 398 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 ASAP3Q8TDY4 903 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 NFKBIZQ9BYH8 718 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 RSAD1Q9HA92 442 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 UPF2Q9HAU5 1272 aaKnown RBP25.26■■□□□ 1.63
FAM228B-208ENST00000613899 KIF3AQ9Y496 699 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 TSPAN1O60635 241 aa25.25■■□□□ 1.63
FAM228B-208ENST00000613899 UBXN11Q5T124 520 aa25.25■■□□□ 1.63
FAM228B-208ENST00000613899 HAUS3Q68CZ6 603 aa25.25■■□□□ 1.63
FAM228B-208ENST00000613899 AGMOQ6ZNB7 445 aa25.25■■□□□ 1.63
FAM228B-208ENST00000613899 NACC1Q96RE7 527 aa25.25■■□□□ 1.63
FAM228B-208ENST00000613899 POLR3FQ9H1D9 316 aaPredicted RBP25.25■■□□□ 1.63
FAM228B-208ENST00000613899 DBR1Q9UK59 544 aaKnown RBP25.25■■□□□ 1.63
FAM228B-208ENST00000613899 NT5C1B-RDH14C9J2C7 533 aa25.24■■□□□ 1.63
FAM228B-208ENST00000613899 MED24O75448 989 aa25.24■■□□□ 1.63
FAM228B-208ENST00000613899 ALADP13716 330 aa25.24■■□□□ 1.63
FAM228B-208ENST00000613899 NCLP19338 710 aaKnown RBP25.24■■□□□ 1.63
FAM228B-208ENST00000613899 GLRA2P23416 452 aa25.24■■□□□ 1.63
FAM228B-208ENST00000613899 RPA1P27694 616 aa25.24■■□□□ 1.63
FAM228B-208ENST00000613899 MBTD1Q05BQ5 628 aa25.24■■□□□ 1.63
FAM228B-208ENST00000613899 TMEM31Q5JXX7 168 aa25.24■■□□□ 1.63
FAM228B-208ENST00000613899 MCPH1Q8NEM0 835 aa25.24■■□□□ 1.63
FAM228B-208ENST00000613899 NRDE2Q9H7Z3 1164 aa25.24■■□□□ 1.63
FAM228B-208ENST00000613899 UBN1Q9NPG3 1134 aa25.24■■□□□ 1.63
FAM228B-208ENST00000613899 KANSL3Q9P2N6 904 aa25.24■■□□□ 1.63
FAM228B-208ENST00000613899 HIDE1A8MVS5 230 aa25.23■■□□□ 1.63
FAM228B-208ENST00000613899 MUTP22033 750 aa25.23■■□□□ 1.63
FAM228B-208ENST00000613899 U2AF2P26368 475 aaKnown RBP eCLIP25.23■■□□□ 1.63
FAM228B-208ENST00000613899 TMEM184AQ6ZMB5 413 aa25.23■■□□□ 1.63
FAM228B-208ENST00000613899 VN1R2Q8NFZ6 395 aa25.23■■□□□ 1.63
FAM228B-208ENST00000613899 GBP3Q9H0R5 595 aa25.23■■□□□ 1.63
FAM228B-208ENST00000613899 GPR37L1O60883 481 aa25.22■■□□□ 1.63
FAM228B-208ENST00000613899 GALTP07902 379 aa25.22■■□□□ 1.63
FAM228B-208ENST00000613899 KCNC3Q14003 757 aa25.22■■□□□ 1.63
FAM228B-208ENST00000613899 POTEGQ6S5H5 508 aa25.22■■□□□ 1.63
FAM228B-208ENST00000613899 MRPL43Q8N983 215 aaKnown RBP25.22■■□□□ 1.63
FAM228B-208ENST00000613899 IGSF21Q96ID5 467 aa25.22■■□□□ 1.63
FAM228B-208ENST00000613899 CSRNP2Q9H175 543 aa25.22■■□□□ 1.63
FAM228B-208ENST00000613899 STK39Q9UEW8 545 aa25.22■■□□□ 1.63
FAM228B-208ENST00000613899 USP15Q9Y4E8 981 aaPredicted RBP25.22■■□□□ 1.63
FAM228B-208ENST00000613899 IPPQ9Y573 584 aa25.22■■□□□ 1.63
FAM228B-208ENST00000613899 C5orf42Q9H799 3197 aa25.22■■□□□ 1.63
FAM228B-208ENST00000613899 A0A087WWV3 80 aa25.21■■□□□ 1.63
FAM228B-208ENST00000613899 C2orf71A6NGG8 1288 aa25.21■■□□□ 1.63
FAM228B-208ENST00000613899 DCXO43602 365 aa25.21■■□□□ 1.63
FAM228B-208ENST00000613899 ITGA4P13612 1032 aa25.21■■□□□ 1.63
FAM228B-208ENST00000613899 CA8P35219 290 aa25.21■■□□□ 1.63
FAM228B-208ENST00000613899 FXR2P51116 673 aaKnown RBP eCLIP25.21■■□□□ 1.63
FAM228B-208ENST00000613899 RBM10P98175 930 aaKnown RBP25.21■■□□□ 1.63
FAM228B-208ENST00000613899 DDX53Q86TM3 631 aaKnown RBP25.21■■□□□ 1.63
FAM228B-208ENST00000613899 TMEM173Q86WV6 379 aaPredicted RBP25.21■■□□□ 1.63
FAM228B-208ENST00000613899 VPS52Q8N1B4 723 aa25.21■■□□□ 1.63
FAM228B-208ENST00000613899 SMG8Q8ND04 991 aaKnown RBP25.21■■□□□ 1.63
FAM228B-208ENST00000613899 CPB2Q96IY4 423 aa25.21■■□□□ 1.63
FAM228B-208ENST00000613899 FAM193BQ96PV7 902 aaPredicted RBP25.21■■□□□ 1.63
FAM228B-208ENST00000613899 LRFN3Q9BTN0 628 aa25.21■■□□□ 1.63
FAM228B-208ENST00000613899 TRIM6Q9C030 488 aaPredicted RBP25.21■■□□□ 1.63
FAM228B-208ENST00000613899 ZBP1Q9H171 429 aa25.21■■□□□ 1.63
FAM228B-208ENST00000613899 DNAJB4Q9UDY4 337 aa25.21■■□□□ 1.63
FAM228B-208ENST00000613899 ARHGEF35A5YM69 484 aa25.2■■□□□ 1.62
FAM228B-208ENST00000613899 LRRIQ4A6NIV6 560 aa25.2■■□□□ 1.62
FAM228B-208ENST00000613899 SLC11A1P49279 550 aa25.2■■□□□ 1.62
FAM228B-208ENST00000613899 GIT2Q14161 759 aa25.2■■□□□ 1.62
FAM228B-208ENST00000613899 AMHR2Q16671 573 aa25.2■■□□□ 1.62
FAM228B-208ENST00000613899 ANKRD54Q6NXT1 300 aa25.2■■□□□ 1.62
FAM228B-208ENST00000613899 HACE1Q8IYU2 909 aa25.2■■□□□ 1.62
FAM228B-208ENST00000613899 CASP10Q92851 521 aa25.2■■□□□ 1.62
FAM228B-208ENST00000613899 TMEM175Q9BSA9 504 aa25.2■■□□□ 1.62
FAM228B-208ENST00000613899 EIF2AQ9BY44 585 aaKnown RBP25.2■■□□□ 1.62
FAM228B-208ENST00000613899 RAB34Q9BZG1 259 aa25.2■■□□□ 1.62
FAM228B-208ENST00000613899 GPRC5CQ9NQ84 441 aa25.2■■□□□ 1.62
FAM228B-208ENST00000613899 STK24Q9Y6E0 443 aa25.2■■□□□ 1.62
FAM228B-208ENST00000613899 HOXB8P17481 243 aaPredicted RBP25.19■■□□□ 1.62
FAM228B-208ENST00000613899 ARF4P18085 180 aaPredicted RBP25.19■■□□□ 1.62
FAM228B-208ENST00000613899 NBR1Q14596 966 aa25.19■■□□□ 1.62
FAM228B-208ENST00000613899 LLGL2Q6P1M3 1020 aa25.19■■□□□ 1.62
FAM228B-208ENST00000613899 MAEAQ7L5Y9 396 aa25.19■■□□□ 1.62
FAM228B-208ENST00000613899 ZNF280BQ86YH2 543 aa25.19■■□□□ 1.62
FAM228B-208ENST00000613899 ZBTB8OSQ8IWT0 167 aa25.19■■□□□ 1.62
FAM228B-208ENST00000613899 C11orf16Q9NQ32 467 aa25.19■■□□□ 1.62
FAM228B-208ENST00000613899 IRAK3Q9Y616 596 aa25.19■■□□□ 1.62
FAM228B-208ENST00000613899 TDRD15B5MCY1 1934 aaKnown RBP25.18■■□□□ 1.62
FAM228B-208ENST00000613899 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.18■■□□□ 1.62
FAM228B-208ENST00000613899 LAD1O00515 517 aa25.18■■□□□ 1.62
FAM228B-208ENST00000613899 INPPL1O15357 1258 aa25.18■■□□□ 1.62
FAM228B-208ENST00000613899 CTSAP10619 480 aa25.18■■□□□ 1.62
FAM228B-208ENST00000613899 CCT6AP40227 531 aaKnown RBP25.18■■□□□ 1.62
FAM228B-208ENST00000613899 CDCA2Q69YH5 1023 aaPredicted RBP25.18■■□□□ 1.62
FAM228B-208ENST00000613899 PADI6Q6TGC4 694 aa25.18■■□□□ 1.62
FAM228B-208ENST00000613899 C4orf32Q8N8J7 132 aa25.18■■□□□ 1.62
FAM228B-208ENST00000613899 TMEM87AQ8NBN3 555 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms