RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MTIF3Q9H2K0 278 aaKnown RBP12.6□□□□□ -0.39
SLIRP-212ENST00000613856 RNPEPQ9H4A4 650 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 ST6GALNAC4Q9H4F1 302 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 ZHX3Q9H4I2 956 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 KCNG1Q9UIX4 513 aa12.6□□□□□ -0.39
SLIRP-212ENST00000613856 BECN2A8MW95 431 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 MAGEB2O15479 319 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 ZEB2O60315 1214 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 PPP1R37O75864 691 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 C22orf31O95567 290 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 POU3F3P20264 500 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-212ENST00000613856 SCP2P22307 547 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 CCNE1P24864 410 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 NCKAP1LP55160 1127 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 PURAQ00577 322 aaKnown RBP12.59□□□□□ -0.39
SLIRP-212ENST00000613856 DMP1Q13316 513 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-212ENST00000613856 AAK1Q2M2I8 961 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 ODR4Q5SWX8 454 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
SLIRP-212ENST00000613856 FAM102BQ5T8I3 360 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 FAM178BQ8IXR5 827 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 SCFD1Q8WVM8 642 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 TCP11Q8WWU5 503 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 NELFBQ8WX92 580 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 HVCN1Q96D96 273 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 STRA6Q9BX79 667 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 FGFBP2Q9BYJ0 223 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 POLR3FQ9H1D9 316 aaPredicted RBP12.59□□□□□ -0.39
SLIRP-212ENST00000613856 MRPL44Q9H9J2 332 aaKnown RBP12.59□□□□□ -0.39
SLIRP-212ENST00000613856 GPRC5CQ9NQ84 441 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 CTNND2Q9UQB3 1225 aa12.59□□□□□ -0.39
SLIRP-212ENST00000613856 BICDL2A1A5D9 508 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 RRN3P2A6NIE6 340 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 GOLGA6L19H0YKK7 550 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 GPR37L1O60883 481 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 MYL3P08590 195 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 INSRRP14616 1297 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 ABCD1P33897 745 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 ARL2P36404 184 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 PSEN2P49810 448 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 CASP5P51878 434 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 LRRC63Q05C16 580 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 PPFIA1Q13136 1202 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 MFSD10Q14728 455 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 PPP2R5AQ15172 486 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 ZCWPW2Q504Y3 356 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 SPATA1Q5VX52 437 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 IER5Q5VY09 327 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 CENPPQ6IPU0 288 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 KLHL10Q6JEL2 608 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 ZNF720Q7Z2F6 126 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 LINC01465Q8N7H1 131 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 GLIS3Q8NEA6 775 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 ZNF507Q8TCN5 953 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 GDPD5Q8WTR4 605 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 P2RX5Q93086 422 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 MED15Q96RN5 788 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 NTPCRQ9BSD7 190 aaKnown RBP12.58□□□□□ -0.4
SLIRP-212ENST00000613856 MTG1Q9BT17 334 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-212ENST00000613856 TBC1D7Q9P0N9 293 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 ARIH1Q9Y4X5 557 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-212ENST00000613856 NRCAMQ92823 1304 aa12.58□□□□□ -0.4
SLIRP-212ENST00000613856 SFI1A8K8P3 1242 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 H0YCG3 227 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 K7ENM7 598 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 GCNT3O95395 438 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 SMIM10L2AP0DMW4 78 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 SMIM10L2BP0DMW5 78 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 MYBP10242 640 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 HOXC8P31273 242 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 NAMPTP43490 491 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 NPTX2P47972 431 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 SMTNP53814 917 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 TPM4P67936 248 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 GRIK4Q16099 956 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 KIAA0753Q2KHM9 967 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 TTI2Q6NXR4 508 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 MAEAQ7L5Y9 396 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 RETREG2Q8NC44 543 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 BSNDQ8WZ55 320 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 HLA-CQ95604 372 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 IFT74Q96LB3 600 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 HSD3B7Q9H2F3 369 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 KCTD10Q9H3F6 313 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 MAPK8IP1Q9UQF2 711 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 NFE2L3Q9Y4A8 694 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 PCDHB13Q9Y5F0 798 aa12.57□□□□□ -0.4
SLIRP-212ENST00000613856 ZMYM2Q9UBW7 1377 aa12.56□□□□□ -0.4
SLIRP-212ENST00000613856 C5orf42Q9H799 3197 aa12.56□□□□□ -0.4
SLIRP-212ENST00000613856 MBLAC1A4D2B0 266 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-212ENST00000613856 PI4K2BG5E9Z4 385 aa12.56□□□□□ -0.4
SLIRP-212ENST00000613856 ZNF18P17022 549 aa12.56□□□□□ -0.4
SLIRP-212ENST00000613856 GLRA2P23416 452 aa12.56□□□□□ -0.4
SLIRP-212ENST00000613856 NMT1P30419 496 aaKnown RBP12.56□□□□□ -0.4
SLIRP-212ENST00000613856 PEX3P56589 373 aa12.56□□□□□ -0.4
SLIRP-212ENST00000613856 STX17P56962 302 aa12.56□□□□□ -0.4
SLIRP-212ENST00000613856 ADAM17P78536 824 aa12.56□□□□□ -0.4
SLIRP-212ENST00000613856 GTF2BQ00403 316 aa12.56□□□□□ -0.4
SLIRP-212ENST00000613856 MXD4Q14582 209 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-212ENST00000613856 TCTN1Q2MV58 587 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms