RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 FRA10AC1Q70Z53 315 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 ZNF280CQ8ND82 737 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 AFG1LQ8WV93 481 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 EIF3CQ99613 913 aaKnown RBP10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 IFT122Q9HBG6 1241 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 EPB41L5Q9HCM4 733 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 CAPN7Q9Y6W3 813 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 MAPK4P31152 587 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 SGMS1Q86VZ5 419 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 GFM2Q969S9 779 aaKnown RBP10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 PARD6BQ9BYG5 372 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 PVALEFA0A1B0GWK0 134 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 LAYNQ6UX15 382 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 ARMC9Q7Z3E5 817 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 SRBD1Q8N5C6 995 aaKnown RBP10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 MB21D1Q8N884 522 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 FAM49AQ9H0Q0 323 aaPredicted RBP10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 RPH3AQ9Y2J0 694 aaPredicted RBP10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 ARHGAP42A6NI28 874 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 OSBPP22059 807 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 ARHGAP4P98171 946 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 YWHAHQ04917 246 aaPredicted RBP10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 MTMR1Q13613 665 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 SFR1Q86XK3 245 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 CHCHD3Q9NX63 227 aaKnown RBP10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 STK38LQ9Y2H1 464 aa10.09□□□□□ -0.79
SRGAP2B-204ENST00000612199 NUP62P37198 522 aaPredicted RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 ST13P50502 369 aaKnown RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 ITPK1Q13572 414 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 MAP3K21Q5TCX8 1036 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 PHLDB3Q6NSJ2 640 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 UNC13DQ70J99 1090 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 RAB44Q7Z6P3 723 aaPredicted RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 TRIM48Q8IWZ4 208 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 CAMKK1Q8N5S9 505 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 LINC00116Q8NCU8 138 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 OSBPL5Q9H0X9 879 aaPredicted RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 SNX6Q9UNH7 406 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 H7C0C1 242 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 K7ERI5 159 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 BAG2O95816 211 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 ATP5OP48047 213 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 GLE1Q53GS7 698 aaKnown RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 RSBN1LQ6PCB5 846 aaPredicted RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 SHC4Q6S5L8 630 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 SENP2Q9HC62 589 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 PAIP2BQ9ULR5 123 aaKnown RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 TRAF3IP3Q9Y228 551 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 MAD1L1Q9Y6D9 718 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 ABCA9Q8IUA7 1624 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 XPOTO43592 962 aaKnown RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 SLC7A5Q01650 507 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 TBL3Q12788 808 aaKnown RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 ALKBH5Q6P6C2 394 aaKnown RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 SH2D3AQ9BRG2 576 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 REXO4Q9GZR2 422 aaKnown RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 CAMSAP1Q5T5Y3 1602 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 SETBP1Q9Y6X0 1596 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 CAMTA2O94983 1202 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 PMLP29590 882 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 TRIM60Q495X7 471 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 SNRNP48Q6IEG0 339 aaKnown RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 THNSL1Q8IYQ7 743 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 SLC10A4Q96EP9 437 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 ANKRD36BP1Q96IX9 119 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 MRPL47Q9HD33 250 aaKnown RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 VCX3AQ9NNX9 186 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 INTS9Q9NV88 658 aaKnown RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 PSAPP07602 524 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 PDIA6Q15084 440 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 SH3BP5LQ7L8J4 393 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 RNF10Q8N5U6 811 aaKnown RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 WDR60Q8WVS4 1066 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 BARHL2Q9NY43 387 aa10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 MAP3K20Q9NYL2 800 aaKnown RBP10.08□□□□□ -0.8
SRGAP2B-204ENST00000612199 EXOSC10Q01780 885 aaKnown RBP10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 CUL1Q13616 776 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 GRM4Q14833 912 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 TOGARAM2Q6ZUX3 1019 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 VN1R5Q7Z5H4 357 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 FBXL13Q8NEE6 735 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 DCAF4Q8WV16 495 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 POLR3CQ9BUI4 534 aaPredicted RBP10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 SPZ1Q9BXG8 430 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 ANO9A1A5B4 782 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 POC1B-GALNT4F8VUJ3 575 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 ECEL1O95672 775 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 IREB2P48200 963 aaKnown RBP10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 PLTPP55058 493 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 PRR5LQ6MZQ0 368 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 EMBQ6PCB8 327 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 TBC1D16Q8TBP0 767 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 CLCN6P51797 869 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 TRIP13Q15645 432 aaPredicted RBP10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 ZNF34Q8IZ26 560 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 RNF139Q8WU17 664 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 CDKL2Q92772 493 aa10.07□□□□□ -0.8
SRGAP2B-204ENST00000612199 HPS3Q969F9 1004 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms