RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 NFU1Q9UMS0 254 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 CHD2O14647 1828 aaKnown RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 ESYT3A0FGR9 886 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 POC1B-GALNT4F8VUJ3 575 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 HUS1O60921 280 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 EPHB4P54760 987 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 PPP2R5CQ13362 524 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 MXD4Q14582 209 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 NCAPHQ15003 741 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 EFCAB12Q6NXP0 572 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 TTI2Q6NXR4 508 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 CROCCP2Q86T23 111 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 FBXO16Q8IX29 292 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 GPC2Q8N158 579 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 SLC30A5Q8TAD4 765 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 ZNF564Q8TBZ8 553 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 RNF25Q96BH1 459 aaPredicted RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 OPTNQ96CV9 577 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 PI4K2AQ9BTU6 479 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 TIPINQ9BVW5 301 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 NUP85Q9BW27 656 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 MRIQ9BWK5 157 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 SEMA6BQ9H3T3 888 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 AGPAT3Q9NRZ7 376 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 ANKEF1Q9NU02 776 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 PCSK1NQ9UHG2 260 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 PIN4Q9Y237 131 aaKnown RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 ANO9A1A5B4 782 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 TMEM150BA6NC51 233 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 NDC80O14777 642 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 ZBTB39O15060 712 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 SLC16A3O15427 465 aaKnown RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 PMS1P54277 932 aaKnown RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 SOX10P56693 466 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 YWHAGP61981 247 aaKnown RBP eCLIP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 BASP1P80723 227 aaKnown RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 FKBP1CQ5VVH2 108 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 MICALL1Q8N3F8 863 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 RNF10Q8N5U6 811 aaKnown RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 BEST2Q8NFU1 509 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 HSPH1Q92598 858 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 OSBPL9Q96SU4 736 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 DDX47Q9H0S4 455 aaKnown RBP7.8□□□□□ -1.16
CSDE1-218ENST00000610726 PXMP2Q9NR77 195 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 SCINQ9Y6U3 715 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 UBE4BO95155 1302 aa7.8□□□□□ -1.16
CSDE1-218ENST00000610726 OATP04181 439 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 TBXAS1P24557 533 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 MAN1A1P33908 653 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 SLCO1A2P46721 670 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 SARNPP82979 210 aaKnown RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 GABPAQ06546 454 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 DGKZQ13574 1117 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 SLC18A3Q16572 532 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 EPC2Q52LR7 807 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 LGSNQ5TDP6 509 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 PDZD4Q76G19 769 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 KCNK18Q7Z418 384 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 PNMA5Q96PV4 448 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 P2RX7Q99572 595 aaKnown RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 PDGFDQ9GZP0 370 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 SPATC1LQ9H0A9 340 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 CYP26B1Q9NR63 512 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 FAM114A2Q9NRY5 505 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 ERAP1Q9NZ08 941 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 MAGED2Q9UNF1 606 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 SNX24Q9Y343 169 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 ITIH6Q6UXX5 1313 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 M0QYV0 167 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 STAMBPO95630 424 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 PLEKP08567 350 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-218ENST00000610726 RARBP10826 455 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 DSG3P32926 999 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 ARL4AP40617 200 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 HERVK_113P62684 666 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 GNGT1P63211 74 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 DR1Q01658 176 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 CNTN2Q02246 1040 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 SETDB1Q15047 1291 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 GEN1Q17RS7 908 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 MUM1L1Q5H9M0 696 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 CFAP157Q5JU67 520 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 PPP1R2P3Q6NXS1 205 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 EP400NLQ6ZTU2 488 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 SCFD1Q8WVM8 642 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 MKL1Q969V6 931 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 IL17RAQ96F46 866 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 CABS1Q96KC9 395 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 ACAP3Q96P50 834 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 AGPAT1Q99943 283 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 CBWD1Q9BRT8 395 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 STK33Q9BYT3 514 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 AGAP1Q9UPQ3 857 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 EML1O00423 815 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 WNT7AO00755 349 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 MCF2LO15068 1137 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 LPXNO60711 386 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 PTPRAP18433 802 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 STX2P32856 288 aa7.79□□□□□ -1.16
CSDE1-218ENST00000610726 LMNB2Q03252 620 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms