RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 DNAJC24Q6P3W2 148 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 NANOGNBQ7Z5D8 188 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 LONP2Q86WA8 852 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 TRIM59Q8IWR1 403 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 RBM41Q96IZ5 413 aaKnown RBP9.72□□□□□ -0.85
COL25A1-208ENST00000610288 CEP170P1Q96L14 293 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 TRIM56Q9BRZ2 755 aaKnown RBP9.72□□□□□ -0.85
COL25A1-208ENST00000610288 LCMT1Q9UIC8 334 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 QRICH2Q9H0J4 1663 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 SALL3Q9BXA9 1300 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 SPHKAPQ2M3C7 1700 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 IGF2BP3O00425 579 aaKnown RBP eCLIP9.72□□□□□ -0.85
COL25A1-208ENST00000610288 CCDC22O60826 627 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 ANP32DO95626 131 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 KCTD2Q14681 263 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 KPNB1Q14974 876 aaKnown RBP9.72□□□□□ -0.85
COL25A1-208ENST00000610288 NAALADL2Q58DX5 795 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 FSCBQ5H9T9 825 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 KRT39Q6A163 491 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 PDZD4Q76G19 769 aaPredicted RBP9.72□□□□□ -0.85
COL25A1-208ENST00000610288 NUDCD3Q8IVD9 361 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 CAVIN3Q969G5 261 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 CARD9Q9H257 536 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 KDM4CQ9H3R0 1056 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 TAF6LQ9Y6J9 622 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 NCF2P19878 526 aaPredicted RBP9.72□□□□□ -0.85
COL25A1-208ENST00000610288 GJA8P48165 433 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 CLEC4GQ6UXB4 293 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 SESTD1Q86VW0 696 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 CLMNQ96JQ2 1002 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 DNAJC7Q99615 494 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 SIKE1Q9BRV8 207 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 UPF3AQ9H1J1 476 aaKnown RBP9.72□□□□□ -0.85
COL25A1-208ENST00000610288 IL1RAPL1Q9NZN1 696 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 CNOT8Q9UFF9 292 aaKnown RBP9.72□□□□□ -0.85
COL25A1-208ENST00000610288 ANAPC7Q9UJX3 599 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 CHMP2BQ9UQN3 213 aa9.72□□□□□ -0.85
COL25A1-208ENST00000610288 A2ML1A8K2U0 1454 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 PNMA6FA0A0J9YX94 578 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 PPP1R3GB7ZBB8 358 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 INO80B-WBP1J3KQ70 363 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 KRT10P13645 584 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 ATICP31939 592 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 HSD17B3P37058 310 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 COPS2P61201 443 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 STX1BP61266 288 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 NAB2Q15742 525 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 SYDE1Q6ZW31 735 aaPredicted RBP9.71□□□□□ -0.85
COL25A1-208ENST00000610288 USP49Q70CQ1 688 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 ICA1LQ8NDH6 482 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 INO80BQ9C086 356 aaPredicted RBP9.71□□□□□ -0.85
COL25A1-208ENST00000610288 PLAGL2Q9UPG8 496 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 KRT38O76015 456 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 CCDC159P0C7I6 412 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 GUCY1A2P33402 732 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 PGM1P36871 562 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 TFDP1Q14186 410 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 KIF22Q14807 665 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 PTPAQ15257 358 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 KLC3Q6P597 504 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 GIMAP8Q8ND71 665 aaPredicted RBP9.71□□□□□ -0.85
COL25A1-208ENST00000610288 HIPK4Q8NE63 616 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 GPR101Q96P66 508 aaPredicted RBP9.71□□□□□ -0.85
COL25A1-208ENST00000610288 UNC45AQ9H3U1 944 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 GGT7Q9UJ14 662 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 ABCA6Q8N139 1617 aa9.71□□□□□ -0.85
COL25A1-208ENST00000610288 ADCY3O60266 1144 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 RAD17O75943 681 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 FSBPO95073 299 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 GHRP10912 638 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 FCER1AP12319 257 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 MARK3P27448 753 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 KNOP1Q1ED39 458 aaKnown RBP9.71□□□□□ -0.86
COL25A1-208ENST00000610288 TBC1D9BQ66K14 1250 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 RGS9BPQ6ZS82 235 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 SYNE4Q8N205 404 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 TTC13Q8NBP0 860 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 SEPT10Q9P0V9 454 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 AXIN2Q9Y2T1 843 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 PP2D1A8MPX8 630 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 DNAJC6O75061 913 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 SKAP2O75563 359 aaPredicted RBP9.71□□□□□ -0.86
COL25A1-208ENST00000610288 CYP2D6P10635 497 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 NQO1P15559 274 aaKnown RBP9.71□□□□□ -0.86
COL25A1-208ENST00000610288 FGFR4P22455 802 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 PRDX5P30044 214 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 MED21Q13503 144 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 DRAP1Q14919 205 aaPredicted RBP9.71□□□□□ -0.86
COL25A1-208ENST00000610288 FRMD5Q7Z6J6 570 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 IGDCC4Q8TDY8 1250 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 PRPF31Q8WWY3 499 aaKnown RBP9.71□□□□□ -0.86
COL25A1-208ENST00000610288 ANKS1AQ92625 1134 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 ERP27Q96DN0 273 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 CCDC138Q96M89 665 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 PHF20Q9BVI0 1012 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 ANLNQ9NQW6 1124 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 SMARCAL1Q9NZC9 954 aa9.71□□□□□ -0.86
COL25A1-208ENST00000610288 DMGDHQ9UI17 866 aaKnown RBP9.71□□□□□ -0.86
COL25A1-208ENST00000610288 ABT1Q9ULW3 272 aaKnown RBP9.71□□□□□ -0.86
COL25A1-208ENST00000610288 ARAP3Q8WWN8 1544 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms