RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 FOXC1Q12948 553 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 HEATR6Q6AI08 1181 aaKnown RBP10.54□□□□□ -0.72
CTCFL-220ENST00000608858 ABHD15Q6UXT9 468 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 CCDC60Q8IWA6 550 aaPredicted RBP10.54□□□□□ -0.72
CTCFL-220ENST00000608858 CLDN23Q96B33 292 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 PGBD1Q96JS3 809 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 CHMP4BQ9H444 224 aaKnown RBP10.54□□□□□ -0.72
CTCFL-220ENST00000608858 ZNF302Q9NR11 478 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 HEBP1Q9NRV9 189 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 PATJQ8NI35 1801 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 MYH15Q9Y2K3 1946 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 NRP1O14786 923 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 TM4SF5O14894 197 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 GIPC1O14908 333 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 NCAM2O15394 837 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 KCNK5O95279 499 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 ATG7O95352 703 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 POMCP01189 267 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 RPL17P18621 184 aaKnown RBP10.53□□□□□ -0.72
CTCFL-220ENST00000608858 KIF5BP33176 963 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 PHKA2P46019 1235 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 HNRNPUQ00839 825 aaKnown RBP eCLIP10.53□□□□□ -0.72
CTCFL-220ENST00000608858 LCE2DQ5TA82 110 aaPredicted RBP10.53□□□□□ -0.72
CTCFL-220ENST00000608858 FAM160B1Q5W0V3 765 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 TWF2Q6IBS0 349 aaKnown RBP10.53□□□□□ -0.72
CTCFL-220ENST00000608858 PSAPL1Q6NUJ1 521 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 GLB1LQ6UWU2 654 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 ZNF852Q6ZMS4 543 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.53□□□□□ -0.72
CTCFL-220ENST00000608858 ITFG1Q8TB96 612 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 NLRP7Q8WX94 980 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 DDX1Q92499 740 aaKnown RBP10.53□□□□□ -0.72
CTCFL-220ENST00000608858 MAP4K1Q92918 833 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 FAM193BQ96PV7 902 aaPredicted RBP10.53□□□□□ -0.72
CTCFL-220ENST00000608858 RPS6KC1Q96S38 1066 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 MXRA8Q9BRK3 442 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 OSBPL6Q9BZF3 934 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 PRKD2Q9BZL6 878 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 PLA2G2FQ9BZM2 168 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 KRT23Q9C075 422 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 ARRDC1-AS1Q9H2J1 176 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 SMOC1Q9H4F8 434 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 AGO4Q9HCK5 861 aaKnown RBP10.53□□□□□ -0.72
CTCFL-220ENST00000608858 POLIQ9UNA4 740 aa10.53□□□□□ -0.72
CTCFL-220ENST00000608858 PRG3Q9Y2Y8 225 aaPredicted RBP10.53□□□□□ -0.72
CTCFL-220ENST00000608858 FLNBO75369 2602 aaKnown RBP10.52□□□□□ -0.73
CTCFL-220ENST00000608858 IGKV6D-21A0A0A0MT36 114 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 SPDYE3A6NKU9 549 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 F8W810 466 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 PIK3CDO00329 1044 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 IFIT3O14879 490 aaKnown RBP10.52□□□□□ -0.73
CTCFL-220ENST00000608858 MAFGO15525 162 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 TGM5O43548 720 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 ADH1AP07327 375 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 NRLP54845 237 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 ANKRD45Q5TZF3 282 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 CWC27Q6UX04 472 aaKnown RBP10.52□□□□□ -0.73
CTCFL-220ENST00000608858 CCDC82Q8N4S0 544 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 KDF1Q8NAX2 398 aaPredicted RBP10.52□□□□□ -0.73
CTCFL-220ENST00000608858 RABGGTAQ92696 567 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 FGF13Q92913 245 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 RRP36Q96EU6 259 aaKnown RBP10.52□□□□□ -0.73
CTCFL-220ENST00000608858 NELL2Q99435 816 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 LMAN1LQ9HAT1 526 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 PRMT8Q9NR22 394 aaPredicted RBP10.52□□□□□ -0.73
CTCFL-220ENST00000608858 DACT1Q9NYF0 836 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 CDH7Q9ULB5 785 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 DSPP15924 2871 aaKnown RBP10.52□□□□□ -0.73
CTCFL-220ENST00000608858 ZMYM6O95789 1325 aa10.52□□□□□ -0.73
CTCFL-220ENST00000608858 IGF2RP11717 2491 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 SOD2P04179 222 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 URODP06132 367 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 TDGF1P13385 188 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 DARSP14868 501 aaKnown RBP10.51□□□□□ -0.73
CTCFL-220ENST00000608858 OR1G1P47890 313 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 SLC26A2P50443 739 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 SATB1Q01826 763 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 ADCY1Q08828 1119 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 IMMTQ16891 758 aaKnown RBP10.51□□□□□ -0.73
CTCFL-220ENST00000608858 STPG1Q5TH74 334 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 C19orf48Q6RUI8 117 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 CYP26C1Q6V0L0 522 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 FAM43BQ6ZT52 329 aaPredicted RBP10.51□□□□□ -0.73
CTCFL-220ENST00000608858 CEP68Q76N32 757 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 FAM160A2Q8N612 972 aaPredicted RBP10.51□□□□□ -0.73
CTCFL-220ENST00000608858 C12orf50Q8NA57 414 aaPredicted RBP10.51□□□□□ -0.73
CTCFL-220ENST00000608858 ING5Q8WYH8 240 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 FAM126AQ9BYI3 521 aaPredicted RBP10.51□□□□□ -0.73
CTCFL-220ENST00000608858 AKAP13Q12802 2813 aa10.51□□□□□ -0.73
CTCFL-220ENST00000608858 WDFY3Q8IZQ1 3526 aa10.5□□□□□ -0.73
CTCFL-220ENST00000608858 SHISA7A6NL88 538 aa10.5□□□□□ -0.73
CTCFL-220ENST00000608858 LRP3O75074 770 aa10.5□□□□□ -0.73
CTCFL-220ENST00000608858 SDSP20132 328 aa10.5□□□□□ -0.73
CTCFL-220ENST00000608858 TMOD1P28289 359 aa10.5□□□□□ -0.73
CTCFL-220ENST00000608858 ZNF76P36508 570 aa10.5□□□□□ -0.73
CTCFL-220ENST00000608858 MAGEA9P43362 315 aa10.5□□□□□ -0.73
CTCFL-220ENST00000608858 RPS9P46781 194 aaKnown RBP10.5□□□□□ -0.73
CTCFL-220ENST00000608858 GPC3P51654 580 aa10.5□□□□□ -0.73
CTCFL-220ENST00000608858 PFKPQ01813 784 aa10.5□□□□□ -0.73
CTCFL-220ENST00000608858 TROAPQ12815 778 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms