RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 M0R2N6 131 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 GFRA3O60609 400 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 BRD1O95696 1058 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 ALDH2P05091 517 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 GCFC2P16383 781 aaKnown RBP16.6■□□□□ 0.25
CTSA-216ENST00000607212 RFC5P40937 340 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 NCBP1Q09161 790 aaKnown RBP16.6■□□□□ 0.25
CTSA-216ENST00000607212 LAMTOR4Q0VGL1 99 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 EMC2Q15006 297 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 B3GNT9Q6UX72 402 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 ZNF280BQ86YH2 543 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 FAM177A1Q8N128 213 aaPredicted RBP16.6■□□□□ 0.25
CTSA-216ENST00000607212 PLCD3Q8N3E9 789 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 RNF149Q8NC42 400 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 PRPF31Q8WWY3 499 aaKnown RBP16.6■□□□□ 0.25
CTSA-216ENST00000607212 MTRQ99707 1265 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 SMOC2Q9H3U7 446 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 SFXN1Q9H9B4 322 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 MRPL17Q9NRX2 175 aaKnown RBP16.6■□□□□ 0.25
CTSA-216ENST00000607212 KANSL3Q9P2N6 904 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 PRG3Q9Y2Y8 225 aaPredicted RBP16.6■□□□□ 0.25
CTSA-216ENST00000607212 ZDBF2Q9HCK1 2354 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 CNTNAP2Q9UHC6 1331 aa16.6■□□□□ 0.25
CTSA-216ENST00000607212 H0Y858 1186 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 ZNF623O75123 536 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 URODP06132 367 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 ITGA4P13612 1032 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 YWHABP31946 246 aaKnown RBP16.59■□□□□ 0.25
CTSA-216ENST00000607212 OR1G1P47890 313 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 AK2P54819 239 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 CYP4A11Q02928 519 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 CTTNQ14247 550 aaKnown RBP16.59■□□□□ 0.25
CTSA-216ENST00000607212 PTPN14Q15678 1187 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 CCDC149Q6ZUS6 474 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 TPH2Q8IWU9 490 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 ZNF579Q8NAF0 562 aaKnown RBP16.59■□□□□ 0.25
CTSA-216ENST00000607212 DYDC2Q96IM9 177 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 APOL6Q9BWW8 343 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 IFT122Q9HBG6 1241 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 BRMS1Q9HCU9 246 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 STK39Q9UEW8 545 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 VAV3Q9UKW4 847 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 PPME1Q9Y570 386 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 ARID2Q68CP9 1835 aa16.59■□□□□ 0.25
CTSA-216ENST00000607212 DTNBO60941 627 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 DDHD2O94830 711 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 MYBP10242 640 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 SCRN1Q12765 414 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 EPHA7Q15375 998 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 NPY5RQ15761 445 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 ELMSAN1Q6PJG2 1045 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 AGMOQ6ZNB7 445 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 ZDHHC14Q8IZN3 488 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 FLCNQ8NFG4 579 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 SLC22A17Q8WUG5 538 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 KLHL5Q96PQ7 755 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 TMEM175Q9BSA9 504 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 PHF20Q9BVI0 1012 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 TM6SF1Q9BZW5 370 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 TRIM6Q9C030 488 aaPredicted RBP16.58■□□□□ 0.24
CTSA-216ENST00000607212 RGL1Q9NZL6 768 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 IRAK3Q9Y616 596 aa16.58■□□□□ 0.24
CTSA-216ENST00000607212 TDRD15B5MCY1 1934 aaKnown RBP16.57■□□□□ 0.24
CTSA-216ENST00000607212 INO80B-WBP1J3KQ70 363 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 ASAP2O43150 1006 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 GAS2O43903 313 aaKnown RBP16.57■□□□□ 0.24
CTSA-216ENST00000607212 ST18O60284 1047 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 NR1I2O75469 434 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 RFX1P22670 979 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 TFDP1Q14186 410 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 PPP4R3AQ6IN85 833 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 OTOP3Q7RTS5 596 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 C4orf19Q8IY42 314 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 SLFN12Q8IYM2 578 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 CNNM3Q8NE01 707 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 WASF1Q92558 559 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 CPB2Q96IY4 423 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 DHX33Q9H6R0 707 aaKnown RBP16.57■□□□□ 0.24
CTSA-216ENST00000607212 ZSWIM4Q9H7M6 989 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 MINDY3Q9H8M7 445 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 KCNMB3Q9NPA1 279 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 UBN1Q9NPG3 1134 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 WRAP73Q9P2S5 460 aaPredicted RBP16.57■□□□□ 0.24
CTSA-216ENST00000607212 ORC3Q9UBD5 711 aaPredicted RBP16.57■□□□□ 0.24
CTSA-216ENST00000607212 FBXL21Q9UKT6 434 aa16.57■□□□□ 0.24
CTSA-216ENST00000607212 NRP1O14786 923 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 TBX3O15119 743 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 EPB41L2O43491 1005 aaKnown RBP16.56■□□□□ 0.24
CTSA-216ENST00000607212 GALR2O43603 387 aaPredicted RBP16.56■□□□□ 0.24
CTSA-216ENST00000607212 B4GALT3O60512 393 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 CNPP09543 421 aaKnown RBP16.56■□□□□ 0.24
CTSA-216ENST00000607212 KRT2P35908 639 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 FOSBP53539 338 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 NOTUMQ6P988 496 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 MRPL10Q7Z7H8 261 aaKnown RBP16.56■□□□□ 0.24
CTSA-216ENST00000607212 FERMT3Q86UX7 667 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 HACE1Q8IYU2 909 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 OXER1Q8TDS5 423 aa16.56■□□□□ 0.24
CTSA-216ENST00000607212 VN1R3Q9BXE9 311 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms