RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 CLUHO75153 1309 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 PSMD10O75832 226 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 OTOGLQ3ZCN5 2332 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 KIAA0319Q5VV43 1072 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 CENPQQ7L2Z9 268 aaPredicted RBP16.83■□□□□ 0.28
SSBP4-214ENST00000607020 CATSPER4Q7RTX7 472 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 C1orf210Q8IVY1 113 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 GPR65Q8IYL9 337 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 RNF168Q8IYW5 571 aaPredicted RBP16.83■□□□□ 0.28
SSBP4-214ENST00000607020 BICD2Q8TD16 824 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 EVPLQ92817 2033 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 MYADMQ96S97 322 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 JPH2Q9BR39 696 aaPredicted RBP16.83■□□□□ 0.28
SSBP4-214ENST00000607020 HERC2P3Q9BVR0 1158 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 TEKT3Q9BXF9 490 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 UNC45AQ9H3U1 944 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 SLC2A4RGQ9NR83 387 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 AGPAT5Q9NUQ2 364 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.83■□□□□ 0.289e-7■■■■□ 19.7
SSBP4-214ENST00000607020 CNTNAP2Q9UHC6 1331 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 SIT1Q9Y3P8 196 aa16.83■□□□□ 0.28
SSBP4-214ENST00000607020 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 INPPL1O15357 1258 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 TEX28O15482 410 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 SSBP05455 408 aaKnown RBP eCLIP16.82■□□□□ 0.28
SSBP4-214ENST00000607020 URODP06132 367 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 GBP2P32456 591 aaPredicted RBP16.82■□□□□ 0.28
SSBP4-214ENST00000607020 AFF1P51825 1210 aaKnown RBP16.82■□□□□ 0.28
SSBP4-214ENST00000607020 MTERF2Q49AM1 385 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 LRCH2Q5VUJ6 765 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 RHPN2Q8IUC4 686 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 ZNF707Q96C28 371 aaPredicted RBP16.82■□□□□ 0.28
SSBP4-214ENST00000607020 CCDC136Q96JN2 1154 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 FAM193BQ96PV7 902 aaPredicted RBP16.82■□□□□ 0.28
SSBP4-214ENST00000607020 PLEKHA4Q9H4M7 779 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 RSAD1Q9HA92 442 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 IFT122Q9HBG6 1241 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 ANO2Q9NQ90 1003 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 DMXL1Q9Y485 3027 aa16.82■□□□□ 0.28
SSBP4-214ENST00000607020 GLUD1P00367 558 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 LAMP2P13473 410 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 RFX1P22670 979 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 HOXA11P31270 313 aaPredicted RBP16.81■□□□□ 0.28
SSBP4-214ENST00000607020 Q4G0T1 1027 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 ERICH6BQ5W0A0 696 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 TAS1R1Q7RTX1 841 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 GPR152Q8TDT2 470 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 RIN2Q8WYP3 895 aaPredicted RBP16.81■□□□□ 0.28
SSBP4-214ENST00000607020 TCEANC2Q96MN5 208 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 UBN1Q9NPG3 1134 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 MARCH5Q9NX47 278 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 SEPT9Q9UHD8 586 aaPredicted RBP16.81■□□□□ 0.28
SSBP4-214ENST00000607020 CA14Q9ULX7 337 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 GPR179Q6PRD1 2367 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 EPG5Q9HCE0 2579 aa16.81■□□□□ 0.28
SSBP4-214ENST00000607020 CEP250Q9BV73 2442 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 CYP3A7-CYP3A51PA0A087WV96 503 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 CHMP2AO43633 222 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 DCNP07585 359 aaKnown RBP16.8■□□□□ 0.28
SSBP4-214ENST00000607020 NCLP19338 710 aaKnown RBP16.8■□□□□ 0.28
SSBP4-214ENST00000607020 CYP3A7P24462 503 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 AK2P54819 239 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 STARD6P59095 220 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 DSG1Q02413 1049 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 UBXN11Q5T124 520 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 MIER3Q7Z3K6 550 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 SRGAP1Q7Z6B7 1085 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 COLGALT2Q8IYK4 626 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 SUMF1Q8NBK3 374 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 CNNM3Q8NE01 707 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 SMG7Q92540 1137 aaKnown RBP16.8■□□□□ 0.28
SSBP4-214ENST00000607020 NT5C3AQ9H0P0 336 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 ARHGEF3Q9NR81 526 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 CHST7Q9NS84 486 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 ZDHHC7Q9NXF8 308 aa16.8■□□□□ 0.28
SSBP4-214ENST00000607020 ZFP37Q9Y6Q3 630 aaPredicted RBP16.8■□□□□ 0.28
SSBP4-214ENST00000607020 TMEM150BA6NC51 233 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 DDX11L8A8MPP1 907 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 RFPL2O75678 378 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 HMGB1P09429 215 aaKnown RBP16.79■□□□□ 0.28
SSBP4-214ENST00000607020 GLUD2P49448 558 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 DSC1Q08554 894 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 HTR4Q13639 388 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 KRT32Q14532 448 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 ZNF528Q3MIS6 628 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 LILRA6Q6PI73 481 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 DCLRE1AQ6PJP8 1040 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 ANO5Q75V66 913 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 KSR1Q8IVT5 923 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 EXOC8Q8IYI6 725 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 MAML2Q8IZL2 1156 aaPredicted RBP16.79■□□□□ 0.28
SSBP4-214ENST00000607020 SHDQ96IW2 340 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 PPME1Q9Y570 386 aa16.79■□□□□ 0.28
SSBP4-214ENST00000607020 C2CD2LO14523 706 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 POMCP01189 267 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 PSMC5P62195 406 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 ADCK5Q3MIX3 580 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 POTEGQ6S5H5 508 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 RASEFQ8IZ41 740 aa16.78■□□□□ 0.28
SSBP4-214ENST00000607020 CCDC148Q8NFR7 591 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms