RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 UBN1Q9NPG3 1134 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 PRDM6Q9NQX0 595 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 KCND2Q9NZV8 630 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 MYO7AQ13402 2215 aa18.3■□□□□ 0.52
LINC00240-203ENST00000606878 CCDC169A6NNP5 214 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 K7ERI5 159 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 ACKR2O00590 384 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 HIP1RO75146 1068 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 OFD1O75665 1012 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 ITGB1P05556 798 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 ITGA4P13612 1032 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 NCLP19338 710 aaKnown RBP18.29■□□□□ 0.52
LINC00240-203ENST00000606878 GUCY2CP25092 1073 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 TMEM132AQ24JP5 1023 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 TIGD5Q53EQ6 642 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 NOMO2Q5JPE7 1267 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 THNSL1Q8IYQ7 743 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 HACE1Q8IYU2 909 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 COLGALT1Q8NBJ5 622 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 TRIM6Q9C030 488 aaPredicted RBP18.29■□□□□ 0.52
LINC00240-203ENST00000606878 CCSER1Q9C0I3 900 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 C17orf75Q9HAS0 396 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 KANSL3Q9P2N6 904 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 CCDC39Q9UFE4 941 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 COG5Q9UP83 839 aa18.29■□□□□ 0.52
LINC00240-203ENST00000606878 CNTNAP2Q9UHC6 1331 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 B4GALT5O43286 388 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 ZSCAN22P10073 491 aaPredicted RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 LIG1P18858 919 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 ALDH7A1P49419 539 aaKnown RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 SLC12A3P55017 1021 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 PEX3P56589 373 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 UBE3AQ05086 875 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 RNASELQ05823 741 aaKnown RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 DMP1Q13316 513 aaPredicted RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 PRPF4BQ13523 1007 aaKnown RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 FOXD4L5Q5VV16 416 aaPredicted RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 SLC27A1Q6PCB7 646 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 KCNT2Q6UVM3 1135 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 AGMOQ6ZNB7 445 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 URGCPQ8TCY9 931 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 ATXN2LQ8WWM7 1075 aaKnown RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 FOXD4L4Q8WXT5 416 aaPredicted RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 HLA-CQ95604 372 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 ZNF558Q96NG5 402 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 EIF2AQ9BY44 585 aaKnown RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 NSUN3Q9H649 340 aaKnown RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 RSAD1Q9HA92 442 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 THEGQ9P2T0 379 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 TFIP11Q9UBB9 837 aaKnown RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 DAXXQ9UER7 740 aaPredicted RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 PUF60Q9UHX1 559 aaKnown RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 FBXO2Q9UK22 296 aaPredicted RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 INPP5FQ9Y2H2 1132 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 RBM19Q9Y4C8 960 aaKnown RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 IPPQ9Y573 584 aa18.28■□□□□ 0.52
LINC00240-203ENST00000606878 MORC2Q9Y6X9 1032 aaPredicted RBP18.28■□□□□ 0.52
LINC00240-203ENST00000606878 CARNS1A5YM72 827 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 MEIS3P2A8K0S8 358 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 SFI1A8K8P3 1242 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 FGF18O76093 207 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 PRKCBP05771 671 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 DDIT3P35638 169 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 PPM1AP35813 382 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 NPTX2P47972 431 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 MRPS5P82675 430 aaKnown RBP18.27■□□□□ 0.52
LINC00240-203ENST00000606878 KRT17Q04695 432 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 KARSQ15046 597 aaKnown RBP18.27■□□□□ 0.52
LINC00240-203ENST00000606878 STK38Q15208 465 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 SPECC1Q5M775 1068 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 KRI1Q8N9T8 703 aaKnown RBP18.27■□□□□ 0.52
LINC00240-203ENST00000606878 SMG8Q8ND04 991 aaKnown RBP18.27■□□□□ 0.52
LINC00240-203ENST00000606878 MICAL1Q8TDZ2 1067 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 POF1BQ8WVV4 589 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 EPSTI1Q96J88 318 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 NTPCRQ9BSD7 190 aaKnown RBP18.27■□□□□ 0.52
LINC00240-203ENST00000606878 SPG21Q9NZD8 308 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 HCSTQ9UBK5 93 aa18.27■□□□□ 0.52
LINC00240-203ENST00000606878 N4BP3O15049 544 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 NCK2O43639 380 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 PLCG1P19174 1290 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 TXLNAP40222 546 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 NASPP49321 788 aaPredicted RBP18.26■□□□□ 0.51
LINC00240-203ENST00000606878 SMTNP53814 917 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 RAD51AP2Q09MP3 1159 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 DHX8Q14562 1220 aaKnown RBP18.26■□□□□ 0.51
LINC00240-203ENST00000606878 AAK1Q2M2I8 961 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 DAW1Q8N136 415 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 PPP2R3CQ969Q6 453 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 CLIC6Q96NY7 704 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 FAM193BQ96PV7 902 aaPredicted RBP18.26■□□□□ 0.51
LINC00240-203ENST00000606878 KIFC3Q9BVG8 833 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 CCDC113Q9H0I3 377 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 RNF39Q9H2S5 420 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 TMEM134Q9H6X4 195 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 KMT5AQ9NQR1 393 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 TBC1D13Q9NVG8 400 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 TRANK1O15050 2925 aa18.26■□□□□ 0.51
LINC00240-203ENST00000606878 PHLPP2Q6ZVD8 1323 aa18.25■□□□□ 0.51
LINC00240-203ENST00000606878 NPTXRO95502 500 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms