RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 IGSF21Q96ID5 467 aa8.5□□□□□ -1.05
CUX1-219ENST00000606749 MTMR9Q96QG7 549 aa8.5□□□□□ -1.05
CUX1-219ENST00000606749 MTRQ99707 1265 aa8.5□□□□□ -1.05
CUX1-219ENST00000606749 XPNPEP1Q9NQW7 623 aa8.5□□□□□ -1.05
CUX1-219ENST00000606749 BMP2KQ9NSY1 1161 aaPredicted RBP8.5□□□□□ -1.05
CUX1-219ENST00000606749 ANKEF1Q9NU02 776 aa8.5□□□□□ -1.05
CUX1-219ENST00000606749 KANSL3Q9P2N6 904 aa8.5□□□□□ -1.05
CUX1-219ENST00000606749 DNAJB4Q9UDY4 337 aa8.5□□□□□ -1.05
CUX1-219ENST00000606749 INPP5FQ9Y2H2 1132 aa8.5□□□□□ -1.05
CUX1-219ENST00000606749 HCFC2Q9Y5Z7 792 aa8.5□□□□□ -1.05
CUX1-219ENST00000606749 IRAK3Q9Y616 596 aa8.5□□□□□ -1.05
CUX1-219ENST00000606749 A0A087WWV3 80 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 B4GALT3O60512 393 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 NEMFO60524 1076 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 EIF5BO60841 1220 aaKnown RBP8.49□□□□□ -1.05
CUX1-219ENST00000606749 ALDH2P05091 517 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 CTSAP10619 480 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 XRCC6P12956 609 aaKnown RBP eCLIP8.49□□□□□ -1.05
CUX1-219ENST00000606749 NCLP19338 710 aaKnown RBP8.49□□□□□ -1.05
CUX1-219ENST00000606749 AXLP30530 894 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 ARL2P36404 184 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 SLC11A1P49279 550 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 FOSBP53539 338 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 PTENP60484 403 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 ITIH3Q06033 890 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 ST3GAL1Q11201 340 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 TRIM29Q14134 588 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 GIT2Q14161 759 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 PCBP1Q15365 356 aaKnown RBP eCLIP8.49□□□□□ -1.056e-6■■■■■ 34.5
CUX1-219ENST00000606749 TPRNQ4KMQ1 711 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 TRIM67Q6ZTA4 783 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 BMP8AQ7Z5Y6 402 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 DIS3L2Q8IYB7 885 aaKnown RBP8.49□□□□□ -1.05
CUX1-219ENST00000606749 SMG8Q8ND04 991 aaKnown RBP8.49□□□□□ -1.05
CUX1-219ENST00000606749 URGCPQ8TCY9 931 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 BCL7CQ8WUZ0 217 aaPredicted RBP8.49□□□□□ -1.05
CUX1-219ENST00000606749 AUTS2Q8WXX7 1259 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 MFSD14AQ96MC6 490 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 VN1R3Q9BXE9 311 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 GBP3Q9H0R5 595 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 ZBP1Q9H171 429 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 TMEM60Q9H2L4 133 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 ADAM7Q9H2U9 754 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 RSAD1Q9HA92 442 aa8.49□□□□□ -1.05
CUX1-219ENST00000606749 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.48□□□□□ -1.05
CUX1-219ENST00000606749 TMEM221A6NGB7 291 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 M0R296 226 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 TSPAN1O60635 241 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 DGAT1O75907 488 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 ERLIN2O94905 339 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 POMCP01189 267 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 SPATA31C1P0DKV0 1188 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 ITGA4P13612 1032 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 CA8P35219 290 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 RARRES1P49788 294 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 NCBP1Q09161 790 aaKnown RBP8.48□□□□□ -1.05
CUX1-219ENST00000606749 TFDP1Q14186 410 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 CES5AQ6NT32 575 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 KANK3Q6NY19 840 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 IFNLR1Q8IU57 520 aaPredicted RBP8.48□□□□□ -1.05
CUX1-219ENST00000606749 C12orf76Q8N812 135 aaPredicted RBP8.48□□□□□ -1.05
CUX1-219ENST00000606749 TMEM87AQ8NBN3 555 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 CNNM3Q8NE01 707 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 ASAP3Q8TDY4 903 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 PIGOQ8TEQ8 1089 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 SLC22A17Q8WUG5 538 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 PBXIP1Q96AQ6 731 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 CPB2Q96IY4 423 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 FBXL18Q96ME1 805 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 FAM193BQ96PV7 902 aaPredicted RBP8.48□□□□□ -1.05
CUX1-219ENST00000606749 TMEM175Q9BSA9 504 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 EIF2AQ9BY44 585 aaKnown RBP8.48□□□□□ -1.05
CUX1-219ENST00000606749 KCNH6Q9H252 994 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 RNF39Q9H2S5 420 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 UBN1Q9NPG3 1134 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 MIOSQ9NXC5 875 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 CDH22Q9UJ99 828 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 LIMCH1Q9UPQ0 1083 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 FAN1Q9Y2M0 1017 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 IPPQ9Y573 584 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 CNTNAP2Q9UHC6 1331 aa8.48□□□□□ -1.05
CUX1-219ENST00000606749 WDFY4Q6ZS81 3184 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 ARL5CA6NH57 179 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 POTEMA6NI47 508 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 INO80B-WBP1J3KQ70 363 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 NRP1O14786 923 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 INPPL1O15357 1258 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 LILRB3O75022 631 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 WEE2P0C1S8 567 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 EPCAMP16422 314 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 ARF4P18085 180 aaPredicted RBP8.47□□□□□ -1.05
CUX1-219ENST00000606749 ATP2B1P20020 1258 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 GLRA2P23416 452 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 MCM7P33993 719 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 GUCY1B3Q02153 619 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 MBTD1Q05BQ5 628 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 CAPSQ13938 189 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 SAFBQ15424 915 aaKnown RBP eCLIP8.47□□□□□ -1.05
CUX1-219ENST00000606749 PTPN14Q15678 1187 aa8.47□□□□□ -1.05
CUX1-219ENST00000606749 AMHR2Q16671 573 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms