RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CATSPER4Q7RTX7 472 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 ZNF720Q7Z2F6 126 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 SRGAP1Q7Z6B7 1085 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 DEFB128Q7Z7B8 93 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 MAP4K3Q8IVH8 894 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 NELFCDQ8IXH7 590 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 SCFD1Q8WVM8 642 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 DPF3Q92784 378 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 GZF1Q9H116 711 aaPredicted RBP8.45□□□□□ -1.06
MSH6-211ENST00000606499 FZD8Q9H461 694 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 ST6GALNAC4Q9H4F1 302 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 ZMYND8Q9ULU4 1186 aaPredicted RBP8.45□□□□□ -1.06
MSH6-211ENST00000606499 PADI3Q9ULW8 664 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 TBX20Q9UMR3 447 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 CNTNAP2Q9UHC6 1331 aa8.45□□□□□ -1.06
MSH6-211ENST00000606499 MICAL3Q7RTP6 2002 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 H0YCG3 227 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 HNRNPDLO14979 420 aaKnown RBP8.44□□□□□ -1.06
MSH6-211ENST00000606499 EIF3DO15371 548 aaKnown RBP eCLIP8.44□□□□□ -1.06
MSH6-211ENST00000606499 RPS6KA5O75582 802 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 ERLIN2O94905 339 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 CSF2RAP15509 400 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 SFPQP23246 707 aaKnown RBP eCLIP8.44□□□□□ -1.06
MSH6-211ENST00000606499 PRCPP42785 496 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 STRN3Q13033 797 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 PAK2Q13177 524 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 PRPF4BQ13523 1007 aaKnown RBP8.44□□□□□ -1.06
MSH6-211ENST00000606499 ALCAMQ13740 583 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 MAPK6Q16659 721 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 BMT2Q1RMZ1 405 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 MFSD5Q6N075 450 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 SLC39A4Q6P5W5 647 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 STXBP4Q6ZWJ1 553 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 CDR2LQ86X02 465 aaPredicted RBP8.44□□□□□ -1.06
MSH6-211ENST00000606499 MYOCDQ8IZQ8 938 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 ZNF710Q8N1W2 664 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 TRIML1Q8N9V2 468 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 SLC17A8Q8NDX2 589 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 ZNF507Q8TCN5 953 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 BADQ92934 168 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 HVCN1Q96D96 273 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 VWCEQ96DN2 955 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 BICD1Q96G01 975 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 CPB2Q96IY4 423 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 TARS2Q9BW92 718 aaKnown RBP8.44□□□□□ -1.06
MSH6-211ENST00000606499 IFIH1Q9BYX4 1025 aaKnown RBP8.44□□□□□ -1.06
MSH6-211ENST00000606499 TMEM134Q9H6X4 195 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 ERVK-5Q9HDB9 667 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 AGPAT5Q9NUQ2 364 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 PRMT7Q9NVM4 692 aaPredicted RBP8.44□□□□□ -1.06
MSH6-211ENST00000606499 PRKAG2Q9UGJ0 569 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 ST3GAL5Q9UNP4 418 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 PIN4Q9Y237 131 aaKnown RBP8.44□□□□□ -1.06
MSH6-211ENST00000606499 PCDHB13Q9Y5F0 798 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 UBE4BO95155 1302 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 RALGAPA2Q2PPJ7 1873 aa8.44□□□□□ -1.06
MSH6-211ENST00000606499 TRANK1O15050 2925 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 PPP1R3GB7ZBB8 358 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 ANKRD63C9JTQ0 380 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 ACKR2O00590 384 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 MGEA5O60502 916 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 CXCL10P02778 98 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 ARF4P18085 180 aaPredicted RBP8.43□□□□□ -1.06
MSH6-211ENST00000606499 SCP2P22307 547 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 NLRP12P59046 1061 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 TYRO3Q06418 890 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 NFX1Q12986 1120 aaKnown RBP8.43□□□□□ -1.06
MSH6-211ENST00000606499 FAM187BQ17R55 369 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 TMEM132AQ24JP5 1023 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 PLEKHG4Q58EX7 1191 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 ATF7IP2Q5U623 682 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 EEF1DP3Q658K8 133 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 KLHL10Q6JEL2 608 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 SASS6Q6UVJ0 657 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 C11orf57Q6ZUT1 292 aaPredicted RBP8.43□□□□□ -1.06
MSH6-211ENST00000606499 SYCP3Q8IZU3 236 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 ADSSL1Q8N142 457 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 GUF1Q8N442 669 aaKnown RBP8.43□□□□□ -1.06
MSH6-211ENST00000606499 USP38Q8NB14 1042 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 TET1Q8NFU7 2136 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 LINC01599Q8WXQ3 324 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 KCNN1Q92952 543 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 PRIMPOLQ96LW4 560 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 ACCSQ96QU6 501 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 ACO2Q99798 780 aaKnown RBP8.43□□□□□ -1.06
MSH6-211ENST00000606499 MRPL4Q9BYD3 311 aaKnown RBP8.43□□□□□ -1.06
MSH6-211ENST00000606499 HAPLN2Q9GZV7 340 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 KCTD10Q9H3F6 313 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 TMX1Q9H3N1 280 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 PDZD7Q9H5P4 517 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 ANKFY1Q9P2R3 1169 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 KCNG1Q9UIX4 513 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 CTNND2Q9UQB3 1225 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 SQORQ9Y6N5 450 aa8.43□□□□□ -1.06
MSH6-211ENST00000606499 TRIM49BA6NDI0 452 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 GPR182O15218 404 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 TGFB1I1O43294 461 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 LETM1O95202 739 aaPredicted RBP8.42□□□□□ -1.06
MSH6-211ENST00000606499 PIGRP01833 764 aa8.42□□□□□ -1.06
MSH6-211ENST00000606499 ACRP10323 421 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms