RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 HOXA2O43364 376 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 MED24O75448 989 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 CSDE1O75534 798 aaKnown RBP6.51□□□□□ -1.37
FOCAD-213ENST00000604254 DGAT1O75907 488 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 ERLIN2O94905 339 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 RB1P06400 928 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 FGFR1P11362 822 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 BMPR1AP36894 532 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 CCT6AP40227 531 aaKnown RBP6.51□□□□□ -1.37
FOCAD-213ENST00000604254 PHKA2P46019 1235 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 RARRES1P49788 294 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 LAMTOR4Q0VGL1 99 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 TFDP1Q14186 410 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 DSC3Q14574 896 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 MXD4Q14582 209 aaPredicted RBP6.51□□□□□ -1.37
FOCAD-213ENST00000604254 SWT1Q5T5J6 900 aaKnown RBP6.51□□□□□ -1.37
FOCAD-213ENST00000604254 LARP1BQ659C4 914 aaKnown RBP6.51□□□□□ -1.37
FOCAD-213ENST00000604254 TWF2Q6IBS0 349 aaKnown RBP6.51□□□□□ -1.37
FOCAD-213ENST00000604254 FERMT3Q86UX7 667 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 CATSPER3Q86XQ3 398 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 ECHDC2Q86YB7 292 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 RNF149Q8NC42 400 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 SNX29Q8TEQ0 813 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 PIGOQ8TEQ8 1089 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 PRPF31Q8WWY3 499 aaKnown RBP6.51□□□□□ -1.37
FOCAD-213ENST00000604254 CLP1Q92989 425 aaKnown RBP6.51□□□□□ -1.37
FOCAD-213ENST00000604254 MRPL38Q96DV4 380 aaKnown RBP6.51□□□□□ -1.37
FOCAD-213ENST00000604254 NACC1Q96RE7 527 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 HSD17B14Q9BPX1 270 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 POLR3CQ9BUI4 534 aaPredicted RBP6.51□□□□□ -1.37
FOCAD-213ENST00000604254 POLR3FQ9H1D9 316 aaPredicted RBP6.51□□□□□ -1.37
FOCAD-213ENST00000604254 TMEM134Q9H6X4 195 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 ELAC1Q9H777 363 aaKnown RBP6.51□□□□□ -1.37
FOCAD-213ENST00000604254 CHST12Q9NRB3 414 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 AAASQ9NRG9 546 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 LMCD1Q9NZU5 365 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 PCDHB6Q9Y5E3 794 aa6.51□□□□□ -1.37
FOCAD-213ENST00000604254 LRRIQ4A6NIV6 560 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 INO80B-WBP1J3KQ70 363 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 ASAP2O43150 1006 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 LINC00271P0C7V0 271 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 SPATA31C1P0DKV0 1188 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 SKIP12755 728 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 LAG3P18627 525 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 PDCP20941 246 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 RPA1P27694 616 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 PRPHP41219 470 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 TOB1P50616 345 aaPredicted RBP6.5□□□□□ -1.37
FOCAD-213ENST00000604254 RAB27AP51159 221 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 CUL4AQ13619 759 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 CAPSQ13938 189 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 FAM102BQ5T8I3 360 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 DTHD1Q6ZMT9 781 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 MAEAQ7L5Y9 396 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 SRGAP1Q7Z6B7 1085 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 CRIPAKQ8N1N5 446 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 LRRC43Q8N309 656 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 MCPH1Q8NEM0 835 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 ZFRQ96KR1 1074 aaKnown RBP6.5□□□□□ -1.37
FOCAD-213ENST00000604254 TMUB1Q9BVT8 246 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 PLVAPQ9BX97 442 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 TMEM117Q9H0C3 514 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 LMAN2LQ9H0V9 348 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 KDM4CQ9H3R0 1056 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 IFT122Q9HBG6 1241 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 C11orf16Q9NQ32 467 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 XPNPEP1Q9NQW7 623 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 AGPAT5Q9NUQ2 364 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 LRWD1Q9UFC0 647 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 DBR1Q9UK59 544 aaKnown RBP6.5□□□□□ -1.37
FOCAD-213ENST00000604254 COG5Q9UP83 839 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 PCDHB12Q9Y5F1 795 aa6.5□□□□□ -1.37
FOCAD-213ENST00000604254 A0A087WWV3 80 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 A0A0U1RQF3 1178 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 VWA3AA6NCI4 1184 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 PRR33A8MZF0 331 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 K7ELQ4 463 aaPredicted RBP6.49□□□□□ -1.37
FOCAD-213ENST00000604254 GRM6O15303 877 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 EOMESO95936 686 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 XRCC6P12956 609 aaKnown RBP eCLIP6.49□□□□□ -1.37
FOCAD-213ENST00000604254 MUTP22033 750 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 PPM1AP35813 382 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 MRE11P49959 708 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 FAM189BP81408 668 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 ATP2C1P98194 919 aaPredicted RBP6.49□□□□□ -1.37
FOCAD-213ENST00000604254 TFF2Q03403 129 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 NCBP1Q09161 790 aaKnown RBP6.49□□□□□ -1.37
FOCAD-213ENST00000604254 PCBP1Q15365 356 aaKnown RBP eCLIP6.49□□□□□ -1.37
FOCAD-213ENST00000604254 ZRSR1Q15695 479 aaKnown RBP6.49□□□□□ -1.37
FOCAD-213ENST00000604254 CSPP1Q1MSJ5 1256 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 TMEM132AQ24JP5 1023 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 LONRF3Q496Y0 759 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 NAALADL2Q58DX5 795 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 KRT79Q5XKE5 535 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 GLB1LQ6UWU2 654 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 EP400NLQ6ZTU2 488 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 BRAPQ7Z569 592 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 HSCBQ8IWL3 235 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 ZBTB8OSQ8IWT0 167 aa6.49□□□□□ -1.37
FOCAD-213ENST00000604254 THNSL1Q8IYQ7 743 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms