RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 SPPL3Q8TCT6 385 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 HELQQ8TDG4 1101 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 CWH43Q9H720 699 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 ALG13Q9NP73 1137 aaKnown RBP12.77□□□□□ -0.37
CCDC12-209ENST00000604164 GPRC5CQ9NQ84 441 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 RNF19AQ9NV58 838 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 SPG21Q9NZD8 308 aa12.77□□□□□ -0.37
CCDC12-209ENST00000604164 PRRC2BQ5JSZ5 2229 aaKnown RBP12.76□□□□□ -0.37
CCDC12-209ENST00000604164 PP2D1A8MPX8 630 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 DLL1O00548 723 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 N4BP3O15049 544 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 ITGA4P13612 1032 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 DMP1Q13316 513 aaPredicted RBP12.76□□□□□ -0.37
CCDC12-209ENST00000604164 PRPF4BQ13523 1007 aaKnown RBP12.76□□□□□ -0.37
CCDC12-209ENST00000604164 ECM1Q16610 540 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 PUS10Q3MIT2 529 aaKnown RBP12.76□□□□□ -0.37
CCDC12-209ENST00000604164 TCEAL5Q5H9L2 206 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 KCNT2Q6UVM3 1135 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 CABP7Q86V35 215 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 MICAL1Q8TDZ2 1067 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 POF1BQ8WVV4 589 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 FAM193BQ96PV7 902 aaPredicted RBP12.76□□□□□ -0.37
CCDC12-209ENST00000604164 ADPGKQ9BRR6 497 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 MMTAG2Q9BU76 263 aaKnown RBP12.76□□□□□ -0.37
CCDC12-209ENST00000604164 RSAD1Q9HA92 442 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 PRDM6Q9NQX0 595 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 TLR9Q9NR96 1032 aa12.76□□□□□ -0.37
CCDC12-209ENST00000604164 RBM19Q9Y4C8 960 aaKnown RBP12.76□□□□□ -0.37
CCDC12-209ENST00000604164 A0A1B0GUA9 196 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 E9PMD0 336 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 OFD1O75665 1012 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 ARF4P18085 180 aaPredicted RBP12.75□□□□□ -0.37
CCDC12-209ENST00000604164 SCP2P22307 547 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 GUCY2CP25092 1073 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 CDC25AP30304 524 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 TXLNAP40222 546 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 RESTQ13127 1097 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 FNDC1Q4ZHG4 1894 aaPredicted RBP12.75□□□□□ -0.37
CCDC12-209ENST00000604164 UBXN11Q5T124 520 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 LRRC55Q6ZSA7 311 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 SYT2Q8N9I0 419 aaPredicted RBP12.75□□□□□ -0.37
CCDC12-209ENST00000604164 MRPS27Q92552 414 aaKnown RBP12.75□□□□□ -0.37
CCDC12-209ENST00000604164 PABPC5Q96DU9 382 aaKnown RBP12.75□□□□□ -0.37
CCDC12-209ENST00000604164 CPB2Q96IY4 423 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 CDCA3Q99618 268 aaPredicted RBP12.75□□□□□ -0.37
CCDC12-209ENST00000604164 FZD8Q9H461 694 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 UBE2ZQ9H832 354 aaPredicted RBP12.75□□□□□ -0.37
CCDC12-209ENST00000604164 NGRNQ9NPE2 291 aaKnown RBP12.75□□□□□ -0.37
CCDC12-209ENST00000604164 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 ZMYM2Q9UBW7 1377 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 FAM50BQ9Y247 325 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 INPP5FQ9Y2H2 1132 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 GIT1Q9Y2X7 761 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 IPPQ9Y573 584 aa12.75□□□□□ -0.37
CCDC12-209ENST00000604164 MORC2Q9Y6X9 1032 aaPredicted RBP12.75□□□□□ -0.37
CCDC12-209ENST00000604164 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.74□□□□□ -0.37
CCDC12-209ENST00000604164 CCDC169A6NNP5 214 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 H0YCG3 227 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 K7ERI5 159 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 ACKR2O00590 384 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 HIP1RO75146 1068 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 ZC3H11AO75152 810 aaKnown RBP eCLIP12.74□□□□□ -0.37
CCDC12-209ENST00000604164 NR1I2O75469 434 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 SSBP05455 408 aaKnown RBP eCLIP12.74□□□□□ -0.37
CCDC12-209ENST00000604164 PRKCBP05771 671 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 SRGAP2BP0DMP2 458 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 SMTNP53814 917 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 BCAR1P56945 870 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 AMHR2Q16671 573 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 TMEM119Q4V9L6 283 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 RINT1Q6NUQ1 792 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 AGMOQ6ZNB7 445 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 C1orf186Q6ZWK4 172 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 LPPQ93052 612 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 TMEM169Q96HH4 297 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 ZNF396Q96N95 335 aaPredicted RBP12.74□□□□□ -0.37
CCDC12-209ENST00000604164 TMEM175Q9BSA9 504 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 TBC1D13Q9NVG8 400 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 CCDC39Q9UFE4 941 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 MTMR6Q9Y217 621 aa12.74□□□□□ -0.37
CCDC12-209ENST00000604164 INPPL1O15357 1258 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 ALDH2P05091 517 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 PLA2G4BP0C869 781 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 ABCD1P33897 745 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 PEX3P56589 373 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 GIT2Q14161 759 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 COL19A1Q14993 1142 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 DCAF4L1Q3SXM0 396 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 LEXMQ3ZCV2 418 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 LONRF3Q496Y0 759 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 EP400NLQ6ZTU2 488 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 SLC39A11Q8N1S5 342 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 SMG8Q8ND04 991 aaKnown RBP12.73□□□□□ -0.37
CCDC12-209ENST00000604164 BSNDQ8WZ55 320 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 PNMA5Q96PV4 448 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 EIF2AQ9BY44 585 aaKnown RBP12.73□□□□□ -0.37
CCDC12-209ENST00000604164 CCSER1Q9C0I3 900 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 CCDC113Q9H0I3 377 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 TMEM134Q9H6X4 195 aa12.73□□□□□ -0.37
CCDC12-209ENST00000604164 KMT5AQ9NQR1 393 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms