RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 ADGRG1Q9Y653 693 aa24.28■■□□□ 1.48
PPFIA3-211ENST00000602848 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.28■■□□□ 1.48
PPFIA3-211ENST00000602848 HNRNPDLO14979 420 aaKnown RBP24.28■■□□□ 1.48
PPFIA3-211ENST00000602848 VAMP7P51809 220 aa24.28■■□□□ 1.48
PPFIA3-211ENST00000602848 CAPSQ13938 189 aa24.28■■□□□ 1.48
PPFIA3-211ENST00000602848 TFDP1Q14186 410 aa24.28■■□□□ 1.48
PPFIA3-211ENST00000602848 PDXDC1Q6P996 788 aa24.28■■□□□ 1.48
PPFIA3-211ENST00000602848 BICD1Q96G01 975 aa24.28■■□□□ 1.48
PPFIA3-211ENST00000602848 EPHB6O15197 1021 aa24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 MMP3P08254 477 aa24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 PON1P27169 355 aa24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 LIG4P49917 911 aa24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 POU5F1BQ06416 359 aa24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 CETN1Q12798 172 aa24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 GJC2Q5T442 439 aaPredicted RBP24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 CDCA2Q69YH5 1023 aaPredicted RBP24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 TOGARAM2Q6ZUX3 1019 aa24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 TMC2Q8TDI7 906 aa24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 POMGNT1Q8WZA1 660 aa24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 GANQ9H2C0 597 aa24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 RNPEPQ9H4A4 650 aa24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 EPN1Q9Y6I3 576 aaPredicted RBP24.27■■□□□ 1.48
PPFIA3-211ENST00000602848 SIP14410 1827 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 TISP43B9A030 160 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 ZNF865P0CJ78 1059 aaPredicted RBP24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 TNNT1P13805 278 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 CYLC1P35663 651 aaPredicted RBP24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 LAMTOR4Q0VGL1 99 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 KLHDC7AQ5VTJ3 777 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 DPY19L2P1Q6NXN4 242 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 SLC39A4Q6P5W5 647 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 ZPBP2Q6X784 338 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 RRAGAQ7L523 313 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 C16orf45Q96MC5 204 aaPredicted RBP24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 MFSD14AQ96MC6 490 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 CRACR2AQ9BSW2 395 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 SUGCTQ9HAC7 445 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 WBP1LQ9NX94 342 aa24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 SUCLA2Q9P2R7 463 aaPredicted RBP24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 GNEQ9Y223 722 aaKnown RBP24.26■■□□□ 1.47
PPFIA3-211ENST00000602848 A6NJR5 290 aa24.25■■□□□ 1.47
PPFIA3-211ENST00000602848 H3BRB1 525 aa24.25■■□□□ 1.47
PPFIA3-211ENST00000602848 INSRRP14616 1297 aa24.25■■□□□ 1.47
PPFIA3-211ENST00000602848 FCGRTP55899 365 aa24.25■■□□□ 1.47
PPFIA3-211ENST00000602848 MKRN4PQ13434 485 aaPredicted RBP24.25■■□□□ 1.47
PPFIA3-211ENST00000602848 SNRNP35Q16560 246 aaKnown RBP24.25■■□□□ 1.47
PPFIA3-211ENST00000602848 ZBTB8OSQ8IWT0 167 aa24.25■■□□□ 1.47
PPFIA3-211ENST00000602848 GPD1LQ8N335 351 aa24.25■■□□□ 1.47
PPFIA3-211ENST00000602848 RDH13Q8NBN7 331 aa24.25■■□□□ 1.47
PPFIA3-211ENST00000602848 CHP1Q99653 195 aa24.25■■□□□ 1.47
PPFIA3-211ENST00000602848 TUT1Q9H6E5 874 aaKnown RBP24.25■■□□□ 1.47
PPFIA3-211ENST00000602848 NDUFA10O95299 355 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 C22orf31O95567 290 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 LDHAP00338 332 aaKnown RBP24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 GTF2H1P32780 548 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 POLR2FP61218 127 aaKnown RBP24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 MTF1Q14872 753 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 EFCAB12Q6NXP0 572 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 FMNL3Q8IVF7 1028 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 NFKBIZQ9BYH8 718 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 FLRT1Q9NZU1 646 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 LRRC53A6NM62 1247 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 SLC9A1P19634 815 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 CYP2B6P20813 491 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 KRT83P78385 493 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 MAP2K1Q02750 393 aaPredicted RBP24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 SFMBT2Q5VUG0 894 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 VTI1AQ96AJ9 217 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 RNF186Q9NXI6 227 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 AIPL1Q9NZN9 384 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 GCNT4Q9P109 453 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 PAXBP1Q9Y5B6 917 aa24.24■■□□□ 1.47
PPFIA3-211ENST00000602848 EIF3CLB5ME19 914 aaKnown RBP24.23■■□□□ 1.47
PPFIA3-211ENST00000602848 EXTL3O43909 919 aa24.23■■□□□ 1.47
PPFIA3-211ENST00000602848 UCHL3P15374 230 aa24.23■■□□□ 1.47
PPFIA3-211ENST00000602848 RFX1P22670 979 aa24.23■■□□□ 1.47
PPFIA3-211ENST00000602848 TMOD1P28289 359 aa24.23■■□□□ 1.47
PPFIA3-211ENST00000602848 MYL7Q01449 175 aa24.23■■□□□ 1.47
PPFIA3-211ENST00000602848 EIF3CQ99613 913 aaKnown RBP24.23■■□□□ 1.47
PPFIA3-211ENST00000602848 CCDC113Q9H0I3 377 aa24.23■■□□□ 1.47
PPFIA3-211ENST00000602848 NHEJ1Q9H9Q4 299 aaPredicted RBP24.23■■□□□ 1.47
PPFIA3-211ENST00000602848 USP20Q9Y2K6 914 aa24.23■■□□□ 1.47
PPFIA3-211ENST00000602848 SSU72P8A0A1W2PR75 194 aa24.22■■□□□ 1.47
PPFIA3-211ENST00000602848 RRN3P2A6NIE6 340 aa24.22■■□□□ 1.47
PPFIA3-211ENST00000602848 ZNF233A6NK53 670 aa24.22■■□□□ 1.47
PPFIA3-211ENST00000602848 DRP2Q13474 957 aa24.22■■□□□ 1.47
PPFIA3-211ENST00000602848 TRIM65Q6PJ69 517 aa24.22■■□□□ 1.47
PPFIA3-211ENST00000602848 LINC01465Q8N7H1 131 aa24.22■■□□□ 1.47
PPFIA3-211ENST00000602848 CCDC42Q96M95 316 aa24.22■■□□□ 1.47
PPFIA3-211ENST00000602848 MRPL4Q9BYD3 311 aaKnown RBP24.22■■□□□ 1.47
PPFIA3-211ENST00000602848 DYNC1LI2O43237 492 aaPredicted RBP24.21■■□□□ 1.47
PPFIA3-211ENST00000602848 IPO7O95373 1038 aaKnown RBP24.21■■□□□ 1.47
PPFIA3-211ENST00000602848 SERPING1P05155 500 aa24.21■■□□□ 1.47
PPFIA3-211ENST00000602848 KLRC1P26715 233 aa24.21■■□□□ 1.47
PPFIA3-211ENST00000602848 TERF1P54274 439 aa24.21■■□□□ 1.47
PPFIA3-211ENST00000602848 MAPK8IP2Q13387 824 aaPredicted RBP24.21■■□□□ 1.47
PPFIA3-211ENST00000602848 ZNF662Q6ZS27 426 aa24.21■■□□□ 1.47
PPFIA3-211ENST00000602848 CBWD2Q8IUF1 395 aa24.21■■□□□ 1.47
PPFIA3-211ENST00000602848 LRRC71Q8N4P6 559 aa24.21■■□□□ 1.47
PPFIA3-211ENST00000602848 EHBP1Q8NDI1 1231 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms