RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 BRIP1Q9BX63 1249 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 POTEB3A0JP26 581 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 TRIM49BA6NDI0 452 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 PRKAB2O43741 272 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 MYO1DO94832 1006 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 HSPA9P38646 679 aaKnown RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 CRKLP46109 303 aaKnown RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 DYNLL1P63167 89 aaKnown RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 POTEBQ6S5H4 581 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 PRMT1Q99873 361 aaKnown RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 FBXL5Q9UKA1 691 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 ANGPT2O15123 496 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 GRAMD1AQ96CP6 724 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 TRABDQ9H4I3 376 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 FGFR4P22455 802 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 RECQLP46063 649 aaPredicted RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 CUL3Q13618 768 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 ORAI2Q96SN7 254 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 LEMD3Q9Y2U8 911 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 ARHGEF5Q12774 1597 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 PHKG2P15735 406 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 UBE3AQ05086 875 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 ITPRIPL1Q6GPH6 555 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 DDX47Q9H0S4 455 aaKnown RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 ZSWIM5Q9P217 1185 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 GGPS1O95749 300 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 TMEM35BQ8NCS4 154 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 ATP11BQ9Y2G3 1177 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 TBXAS1P24557 533 aaPredicted RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 PRCPP42785 496 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 GCLMP48507 274 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 SERPINB4P48594 390 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 BLVRAP53004 296 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 KDSRQ06136 332 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 COASYQ13057 564 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 HIC1Q14526 733 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 XXYLT1Q8NBI6 393 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 ABHD8Q96I13 439 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 ASCC2Q9H1I8 757 aaPredicted RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 MORC2Q9Y6X9 1032 aaPredicted RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 ATP7BP35670 1465 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 CSPG5O95196 566 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 KCNH2Q12809 1159 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 CCDC137Q6PK04 289 aaKnown RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 DYNLL2Q96FJ2 89 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 DDX56Q9NY93 547 aaKnown RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 HEATR6Q6AI08 1181 aaKnown RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 C1orf228Q6PIY5 440 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 OR6B3Q8NGW1 331 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 DHX36Q9H2U1 1008 aaKnown RBP10.18□□□□□ -0.78
CSMD1-217ENST00000602723 ARL2BPQ9Y2Y0 163 aa10.18□□□□□ -0.78
CSMD1-217ENST00000602723 VCAM1P19320 739 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 ZNF211Q13398 564 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 RABGAP1LQ5R372 815 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 B4GALNT2Q8NHY0 566 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 PUS7LQ9H0K6 701 aaKnown RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 SENP1Q9P0U3 644 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 SLC9A2Q9UBY0 812 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 IP6K2Q9UHH9 426 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 SAMD9Q5K651 1589 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 CDK12Q9NYV4 1490 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 TBC1D4O60343 1298 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 ENO1P06733 434 aaKnown RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 NCAPHQ15003 741 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 LRRC14Q15048 493 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 THAP11Q96EK4 314 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 EGFL8Q99944 293 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 ARHGAP31Q2M1Z3 1444 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 POTEMA6NI47 508 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 SEC24DO94855 1032 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 ZCCHC17Q9NP64 241 aaKnown RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 IRX1P78414 480 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 PLEKHM3Q6ZWE6 761 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 COG1Q8WTW3 980 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 WDR24Q96S15 920 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 SMAD1Q15797 465 aaKnown RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 DHX40Q8IX18 779 aaKnown RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 PPP1R36Q96LQ0 422 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 WWP1Q9H0M0 922 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 OSBPP22059 807 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 PEX3P56589 373 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 SLC27A3Q5K4L6 730 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 SLC30A9Q6PML9 568 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 AGR3Q8TD06 166 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 CLRN2A0PK11 232 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 FAM187AA6NFU0 413 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 KCNA3P22001 575 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 GRIN1Q05586 938 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 DHX34Q14147 1143 aaKnown RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 CC2D2BQ6DHV5 1058 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 NPHS2Q9NP85 383 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 PLEKHA8P1O95397 391 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 FAM83BQ5T0W9 1011 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 ZNF746Q6NUN9 644 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 CDR2LQ86X02 465 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-217ENST00000602723 OR6P1Q8NGX9 317 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 CNKSR1Q969H4 720 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 ATXN7L3BQ96GX2 97 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 SDC4P31431 198 aa10.17□□□□□ -0.78
CSMD1-217ENST00000602723 KLC1Q07866 573 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms