RNA–Protein interactions for RNA: ENST00000602544.5

SFXN2-206, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-206ENST00000602544 APBB1IPQ7Z5R6 666 aaPredicted RBP16.3■□□□□ 0.2
SFXN2-206ENST00000602544 SYT2Q8N9I0 419 aaPredicted RBP16.3■□□□□ 0.2
SFXN2-206ENST00000602544 KRI1Q8N9T8 703 aaKnown RBP16.3■□□□□ 0.2
SFXN2-206ENST00000602544 COLGALT1Q8NBJ5 622 aa16.3■□□□□ 0.2
SFXN2-206ENST00000602544 BSNDQ8WZ55 320 aa16.3■□□□□ 0.2
SFXN2-206ENST00000602544 ADPGKQ9BRR6 497 aa16.3■□□□□ 0.2
SFXN2-206ENST00000602544 RUSC1Q9BVN2 902 aa16.3■□□□□ 0.2
SFXN2-206ENST00000602544 APOL6Q9BWW8 343 aa16.3■□□□□ 0.2
SFXN2-206ENST00000602544 RSAD1Q9HA92 442 aa16.3■□□□□ 0.2
SFXN2-206ENST00000602544 KANSL3Q9P2N6 904 aa16.3■□□□□ 0.2
SFXN2-206ENST00000602544 THEGQ9P2T0 379 aa16.3■□□□□ 0.2
SFXN2-206ENST00000602544 TTC3P53804 2025 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 PHLPP2Q6ZVD8 1323 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 CARNS1A5YM72 827 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 K7ERI5 159 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 N4BP3O15049 544 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 GRM6O15303 877 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 B4GALT5O43286 388 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 NPTXRO95502 500 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 ATF7P17544 494 aaPredicted RBP16.29■□□□□ 0.2
SFXN2-206ENST00000602544 ARF4P18085 180 aaPredicted RBP16.29■□□□□ 0.2
SFXN2-206ENST00000602544 NCLP19338 710 aaKnown RBP16.29■□□□□ 0.2
SFXN2-206ENST00000602544 GUCY2CP25092 1073 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 PPM1AP35813 382 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 PEX3P56589 373 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 GRIN1Q05586 938 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 SLC39A14Q15043 492 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 KARSQ15046 597 aaKnown RBP16.29■□□□□ 0.2
SFXN2-206ENST00000602544 PTPAQ15257 358 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 AAK1Q2M2I8 961 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 FOXD4L6Q3SYB3 417 aaPredicted RBP16.29■□□□□ 0.2
SFXN2-206ENST00000602544 SPECC1Q5M775 1068 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 SLC27A1Q6PCB7 646 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 FOXD4L3Q6VB84 417 aaPredicted RBP16.29■□□□□ 0.2
SFXN2-206ENST00000602544 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 EP400NLQ6ZTU2 488 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 HLA-CQ95604 372 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 USP28Q96RU2 1077 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 FZD8Q9H461 694 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 NSUN3Q9H649 340 aaKnown RBP16.29■□□□□ 0.2
SFXN2-206ENST00000602544 CWH43Q9H720 699 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 C17orf75Q9HAS0 396 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 KMT5AQ9NQR1 393 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 RNF19AQ9NV58 838 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 COG5Q9UP83 839 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 RBM19Q9Y4C8 960 aaKnown RBP16.29■□□□□ 0.2
SFXN2-206ENST00000602544 IPPQ9Y573 584 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 LAMA2P24043 3122 aaKnown RBP16.29■□□□□ 0.2
SFXN2-206ENST00000602544 SIP14410 1827 aa16.29■□□□□ 0.2
SFXN2-206ENST00000602544 ACKR2O00590 384 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 OFD1O75665 1012 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 FGF18O76093 207 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 ITGB1P05556 798 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 LINC00271P0C7V0 271 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 PLCG1P19174 1290 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 NPTX2P47972 431 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 MRPS5P82675 430 aaKnown RBP16.28■□□□□ 0.2
SFXN2-206ENST00000602544 BMS1Q14692 1282 aaKnown RBP16.28■□□□□ 0.2
SFXN2-206ENST00000602544 AMHR2Q16671 573 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 FAM187BQ17R55 369 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 UBXN11Q5T124 520 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 RRAGBQ5VZM2 374 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 KCNT2Q6UVM3 1135 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 MRPL10Q7Z7H8 261 aaKnown RBP16.28■□□□□ 0.2
SFXN2-206ENST00000602544 GPBP1Q86WP2 473 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 SPPL3Q8TCT6 385 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 POF1BQ8WVV4 589 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 CLIC6Q96NY7 704 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 KIFC3Q9BVG8 833 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 EIF2AQ9BY44 585 aaKnown RBP16.28■□□□□ 0.2
SFXN2-206ENST00000602544 CCSER1Q9C0I3 900 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 GBP3Q9H0R5 595 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 PRDM6Q9NQX0 595 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 SPG21Q9NZD8 308 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 TFIP11Q9UBB9 837 aaKnown RBP16.28■□□□□ 0.2
SFXN2-206ENST00000602544 PARP2Q9UGN5 583 aa16.28■□□□□ 0.2
SFXN2-206ENST00000602544 FBXO2Q9UK22 296 aaPredicted RBP16.28■□□□□ 0.2
SFXN2-206ENST00000602544 COL4A6Q14031 1691 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 A0A1B0GUA9 196 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 SFI1A8K8P3 1242 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 SPTLC2O15270 562 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 ZC3H11AO75152 810 aaKnown RBP eCLIP16.27■□□□□ 0.2
SFXN2-206ENST00000602544 F13A1P00488 732 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 SLC12A3P55017 1021 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 UBE3AQ05086 875 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 AGMOQ6ZNB7 445 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 LRRC55Q6ZSA7 311 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 CDR2LQ86X02 465 aaPredicted RBP16.27■□□□□ 0.2
SFXN2-206ENST00000602544 ATXN2LQ8WWM7 1075 aaKnown RBP16.27■□□□□ 0.2
SFXN2-206ENST00000602544 RAD54LQ92698 747 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 SYMPKQ92797 1274 aaKnown RBP16.27■□□□□ 0.2
SFXN2-206ENST00000602544 EPSTI1Q96J88 318 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 ZHX3Q9H4I2 956 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 HCSTQ9UBK5 93 aa16.27■□□□□ 0.2
SFXN2-206ENST00000602544 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.2
SFXN2-206ENST00000602544 GBF1Q92538 1859 aa16.27■□□□□ 0.19
SFXN2-206ENST00000602544 MYO9BQ13459 2157 aa16.26■□□□□ 0.19
SFXN2-206ENST00000602544 H0YCG3 227 aa16.26■□□□□ 0.19
SFXN2-206ENST00000602544 NCK2O43639 380 aa16.26■□□□□ 0.19
SFXN2-206ENST00000602544 TBCAO75347 108 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms