RNA–Protein interactions for RNA: ENST00000602173.5

RAB4B-208, Transcript of RAB4B, member RAS oncogene family, human

TSL 3

Gene RAB4B, Length 592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB4B-208	ENST00000602173	DDX53	Q86TM3	631 aa	Known RBP	13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	VPS52	Q8N1B4	723 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	EDA	Q92838	391 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	CASP10	Q92851	521 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	PGBD4	Q96DM1	585 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	IGSF21	Q96ID5	467 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	MTR	Q99707	1265 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	APOL5	Q9BWW9	433 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	ZBP1	Q9H171	429 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	ANKEF1	Q9NU02	776 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	DNAJB4	Q9UDY4	337 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	HCFC2	Q9Y5Z7	792 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	IRAK3	Q9Y616	596 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	ZDBF2	Q9HCK1	2354 aa		13.94	□□□□□ -0.18
RAB4B-208	ENST00000602173	DENND4A	Q7Z401	1863 aa		13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	NEMF	O60524	1076 aa		13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	CLASP2	O75122	1294 aa	Known RBP	13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	AFF1	P51825	1210 aa	Known RBP	13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	PTEN	P60484	403 aa		13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	RNASEL	Q05823	741 aa	Known RBP	13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	TRIM29	Q14134	588 aa		13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	MXD4	Q14582	209 aa	Predicted RBP	13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	HFE2	Q6ZVN8	426 aa		13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	ZNF280B	Q86YH2	543 aa		13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	RPGRIP1	Q96KN7	1286 aa		13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	TMEM60	Q9H2L4	133 aa		13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	PLXNA3	P51805	1871 aa		13.93	□□□□□ -0.18
RAB4B-208	ENST00000602173	CNTNAP2	Q9UHC6	1331 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	DDHD2	O94830	711 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	CTSA	P10619	480 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	NCL	P19338	710 aa	Known RBP	13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	ARL2	P36404	184 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	SLC11A1	P49279	550 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	RARRES1	P49788	294 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	POU5F1B	Q06416	359 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	BMS1	Q14692	1282 aa	Known RBP	13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	SMG8	Q8ND04	991 aa	Known RBP	13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	URGCP	Q8TCY9	931 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	AUTS2	Q8WXX7	1259 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	VN1R3	Q9BXE9	311 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	BACH2	Q9BYV9	841 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	GBP3	Q9H0R5	595 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	RSAD1	Q9HA92	442 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	KANSL3	Q9P2N6	904 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173	KMT2E	Q8IZD2	1858 aa		13.92	□□□□□ -0.18
RAB4B-208	ENST00000602173		A0A087WWV3	80 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	POTEM	A6NI47	508 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	TSPAN1	O60635	241 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	DGAT1	O75907	488 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	ERLIN2	O94905	339 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	XRCC6	P12956	609 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	AXL	P30530	894 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	CAPS	Q13938	189 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	GIT2	Q14161	759 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	TPRN	Q4KMQ1	711 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	CNNM3	Q8NE01	707 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	ASAP3	Q8TDY4	903 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	PIGO	Q8TEQ8	1089 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	SLC22A17	Q8WUG5	538 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	TMEM175	Q9BSA9	504 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	ADAM7	Q9H2U9	754 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	CDH22	Q9UJ99	828 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	LIMCH1	Q9UPQ0	1083 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	DOCK6	Q96HP0	2047 aa		13.91	□□□□□ -0.18
RAB4B-208	ENST00000602173	PIEZO1	Q92508	2521 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	INO80B-WBP1	J3KQ70	363 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	POMC	P01189	267 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	ALDH2	P05091	517 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	SPATA31C1	P0DKV0	1188 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	ATP2B1	P20020	1258 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	GLRA2	P23416	452 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	HOXD11	P31277	338 aa	Predicted RBP	13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	MCM7	P33993	719 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	CA8	P35219	290 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	ZXDA	P98168	799 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	GUCY1B3	Q02153	619 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	MBTD1	Q05BQ5	628 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	ITIH3	Q06033	890 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	TFDP1	Q14186	410 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	AMHR2	Q16671	573 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	TRIM67	Q6ZTA4	783 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	BMP8A	Q7Z5Y6	402 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	CCDC51	Q96ER9	411 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	CPB2	Q96IY4	423 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	EIF2A	Q9BY44	585 aa	Known RBP	13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	NFKBIZ	Q9BYH8	718 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	RNF39	Q9H2S5	420 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	IPP	Q9Y573	584 aa		13.9	□□□□□ -0.18
RAB4B-208	ENST00000602173	MYH11	P35749	1972 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	TMEM221	A6NGB7	291 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173		M0R296	226 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	NRP1	O14786	923 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	INPPL1	O15357	1258 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	LILRB3	O75022	631 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	ITGA4	P13612	1032 aa		13.89	□□□□□ -0.19
RAB4B-208	ENST00000602173	EPCAM	P16422	314 aa		13.89	□□□□□ -0.19

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