RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 RBM10P98175 930 aaKnown RBP25.18■■□□□ 1.62
SSBP4-209ENST00000601357 MBTD1Q05BQ5 628 aa25.18■■□□□ 1.62
SSBP4-209ENST00000601357 AMHR2Q16671 573 aa25.18■■□□□ 1.62
SSBP4-209ENST00000601357 CCDC43Q96MW1 224 aaKnown RBP25.18■■□□□ 1.62
SSBP4-209ENST00000601357 NRDE2Q9H7Z3 1164 aa25.18■■□□□ 1.62
SSBP4-209ENST00000601357 ENTPD7Q9NQZ7 604 aa25.18■■□□□ 1.62
SSBP4-209ENST00000601357 CNTNAP2Q9UHC6 1331 aa25.17■■□□□ 1.62
SSBP4-209ENST00000601357 NT5C1B-RDH14C9J2C7 533 aa25.17■■□□□ 1.62
SSBP4-209ENST00000601357 ST18O60284 1047 aa25.17■■□□□ 1.62
SSBP4-209ENST00000601357 USO1O60763 962 aaKnown RBP25.17■■□□□ 1.62
SSBP4-209ENST00000601357 ZC3H11AO75152 810 aaKnown RBP eCLIP25.17■■□□□ 1.62
SSBP4-209ENST00000601357 NCLP19338 710 aaKnown RBP25.17■■□□□ 1.62
SSBP4-209ENST00000601357 SSTR3P32745 418 aaPredicted RBP25.17■■□□□ 1.62
SSBP4-209ENST00000601357 TOB1P50616 345 aaPredicted RBP25.17■■□□□ 1.62
SSBP4-209ENST00000601357 GNL2Q13823 731 aaKnown RBP25.17■■□□□ 1.62
SSBP4-209ENST00000601357 NBR1Q14596 966 aa25.17■■□□□ 1.62
SSBP4-209ENST00000601357 TMEM184AQ6ZMB5 413 aa25.17■■□□□ 1.62
SSBP4-209ENST00000601357 TMEM173Q86WV6 379 aaPredicted RBP25.17■■□□□ 1.62
SSBP4-209ENST00000601357 SMG8Q8ND04 991 aaKnown RBP25.17■■□□□ 1.62
SSBP4-209ENST00000601357 NACC1Q96RE7 527 aa25.17■■□□□ 1.62
SSBP4-209ENST00000601357 POLR3FQ9H1D9 316 aaPredicted RBP25.17■■□□□ 1.62
SSBP4-209ENST00000601357 NOL7Q9UMY1 257 aaKnown RBP25.17■■□□□ 1.62
SSBP4-209ENST00000601357 INPP5FQ9Y2H2 1132 aa25.17■■□□□ 1.62
SSBP4-209ENST00000601357 CARNS1A5YM72 827 aa25.16■■□□□ 1.62
SSBP4-209ENST00000601357 B4GALT3O60512 393 aa25.16■■□□□ 1.62
SSBP4-209ENST00000601357 FXR2P51116 673 aaKnown RBP eCLIP25.16■■□□□ 1.62
SSBP4-209ENST00000601357 AFF1P51825 1210 aaKnown RBP25.16■■□□□ 1.62
SSBP4-209ENST00000601357 POTEGQ6S5H5 508 aa25.16■■□□□ 1.62
SSBP4-209ENST00000601357 ERMNQ8TAM6 284 aa25.16■■□□□ 1.62
SSBP4-209ENST00000601357 CCDC51Q96ER9 411 aa25.16■■□□□ 1.62
SSBP4-209ENST00000601357 RSAD1Q9HA92 442 aa25.16■■□□□ 1.62
SSBP4-209ENST00000601357 DNAJB4Q9UDY4 337 aa25.16■■□□□ 1.62
SSBP4-209ENST00000601357 INO80B-WBP1J3KQ70 363 aa25.15■■□□□ 1.62
SSBP4-209ENST00000601357 CD2BP2O95400 341 aaKnown RBP25.15■■□□□ 1.62
SSBP4-209ENST00000601357 GALTP07902 379 aa25.15■■□□□ 1.62
SSBP4-209ENST00000601357 MUTP22033 750 aa25.15■■□□□ 1.62
SSBP4-209ENST00000601357 NOTUMQ6P988 496 aa25.15■■□□□ 1.62
SSBP4-209ENST00000601357 TMC7Q7Z402 723 aa25.15■■□□□ 1.62
SSBP4-209ENST00000601357 ZNF280BQ86YH2 543 aa25.15■■□□□ 1.62
SSBP4-209ENST00000601357 MRPL43Q8N983 215 aaKnown RBP25.15■■□□□ 1.62
SSBP4-209ENST00000601357 CNNM3Q8NE01 707 aa25.15■■□□□ 1.62
SSBP4-209ENST00000601357 MCPH1Q8NEM0 835 aa25.15■■□□□ 1.62
SSBP4-209ENST00000601357 BCL7CQ8WUZ0 217 aaPredicted RBP25.15■■□□□ 1.62
SSBP4-209ENST00000601357 TMEM169Q96HH4 297 aa25.15■■□□□ 1.62
SSBP4-209ENST00000601357 EIF2AQ9BY44 585 aaKnown RBP25.15■■□□□ 1.62
SSBP4-209ENST00000601357 C11orf16Q9NQ32 467 aa25.15■■□□□ 1.62
SSBP4-209ENST00000601357 GPRC5CQ9NQ84 441 aa25.15■■□□□ 1.62
SSBP4-209ENST00000601357 IPPQ9Y573 584 aa25.15■■□□□ 1.62
SSBP4-209ENST00000601357 C2orf71A6NGG8 1288 aa25.14■■□□□ 1.62
SSBP4-209ENST00000601357 INPPL1O15357 1258 aa25.14■■□□□ 1.62
SSBP4-209ENST00000601357 RNASELQ05823 741 aaKnown RBP25.14■■□□□ 1.62
SSBP4-209ENST00000601357 SMC1AQ14683 1233 aaKnown RBP25.14■■□□□ 1.62
SSBP4-209ENST00000601357 URGCPQ8TCY9 931 aa25.14■■□□□ 1.62
SSBP4-209ENST00000601357 IGSF21Q96ID5 467 aa25.14■■□□□ 1.62
SSBP4-209ENST00000601357 CPB2Q96IY4 423 aa25.14■■□□□ 1.62
SSBP4-209ENST00000601357 TMX3Q96JJ7 454 aa25.14■■□□□ 1.62
SSBP4-209ENST00000601357 POP1Q99575 1024 aaKnown RBP25.14■■□□□ 1.62
SSBP4-209ENST00000601357 CSRNP2Q9H175 543 aa25.14■■□□□ 1.62
SSBP4-209ENST00000601357 PCDHB6Q9Y5E3 794 aa25.14■■□□□ 1.62
SSBP4-209ENST00000601357 DDHD2O94830 711 aa25.13■■□□□ 1.61
SSBP4-209ENST00000601357 ARF4P18085 180 aaPredicted RBP25.13■■□□□ 1.61
SSBP4-209ENST00000601357 COL9A1P20849 921 aa25.13■■□□□ 1.61
SSBP4-209ENST00000601357 SLC11A1P49279 550 aa25.13■■□□□ 1.61
SSBP4-209ENST00000601357 PDIA5Q14554 519 aa25.13■■□□□ 1.61
SSBP4-209ENST00000601357 HAUS3Q68CZ6 603 aa25.13■■□□□ 1.61
SSBP4-209ENST00000601357 DDX53Q86TM3 631 aaKnown RBP25.13■■□□□ 1.61
SSBP4-209ENST00000601357 ZBP1Q9H171 429 aa25.13■■□□□ 1.61
SSBP4-209ENST00000601357 UBN1Q9NPG3 1134 aa25.13■■□□□ 1.61
SSBP4-209ENST00000601357 KANSL3Q9P2N6 904 aa25.13■■□□□ 1.61
SSBP4-209ENST00000601357 USP15Q9Y4E8 981 aaPredicted RBP25.13■■□□□ 1.61
SSBP4-209ENST00000601357 B4GALT5O43286 388 aa25.12■■□□□ 1.61
SSBP4-209ENST00000601357 NCBP1Q09161 790 aaKnown RBP25.12■■□□□ 1.61
SSBP4-209ENST00000601357 PTGDRQ13258 359 aa25.12■■□□□ 1.61
SSBP4-209ENST00000601357 ECM1Q16610 540 aa25.12■■□□□ 1.61
SSBP4-209ENST00000601357 CDCA2Q69YH5 1023 aaPredicted RBP25.12■■□□□ 1.61
SSBP4-209ENST00000601357 MAEAQ7L5Y9 396 aa25.12■■□□□ 1.61
SSBP4-209ENST00000601357 IGSF22Q8N9C0 903 aa25.12■■□□□ 1.61
SSBP4-209ENST00000601357 GBP3Q9H0R5 595 aa25.12■■□□□ 1.61
SSBP4-209ENST00000601357 UPF2Q9HAU5 1272 aaKnown RBP25.12■■□□□ 1.61
SSBP4-209ENST00000601357 LRWD1Q9UFC0 647 aa25.12■■□□□ 1.61
SSBP4-209ENST00000601357 KIF3AQ9Y496 699 aa25.12■■□□□ 1.61
SSBP4-209ENST00000601357 IRAK3Q9Y616 596 aa25.12■■□□□ 1.61
SSBP4-209ENST00000601357 GPR37L1O60883 481 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 SRGAP2BP0DMP2 458 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 ITGA4P13612 1032 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 CYP11B2P19099 503 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 PADI6Q6TGC4 694 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 PPP4R3CPQ6ZMV5 832 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 VPS52Q8N1B4 723 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 SUSD6Q92537 303 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 TBC1D32Q96NH3 1257 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 TMEM175Q9BSA9 504 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 LRFN3Q9BTN0 628 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 VN1R3Q9BXE9 311 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 S1PR5Q9H228 398 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 RNF39Q9H2S5 420 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 HES2Q9Y543 173 aa25.11■■□□□ 1.61
SSBP4-209ENST00000601357 A0A1B0GUA9 196 aa25.1■■□□□ 1.61
SSBP4-209ENST00000601357 LRRIQ4A6NIV6 560 aa25.1■■□□□ 1.61
SSBP4-209ENST00000601357 CTSAP10619 480 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms