RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 TAS1R3Q7RTX0 852 aa17.42■□□□□ 0.38
RPS28-203ENST00000600659 CDR2LQ86X02 465 aaPredicted RBP17.42■□□□□ 0.38
RPS28-203ENST00000600659 HELQQ8TDG4 1101 aa17.42■□□□□ 0.38
RPS28-203ENST00000600659 PRDM6Q9NQX0 595 aa17.42■□□□□ 0.38
RPS28-203ENST00000600659 TYW1Q9NV66 732 aaKnown RBP17.42■□□□□ 0.38
RPS28-203ENST00000600659 RNF216Q9NWF9 866 aaPredicted RBP17.42■□□□□ 0.38
RPS28-203ENST00000600659 LMCD1Q9NZU5 365 aa17.42■□□□□ 0.38
RPS28-203ENST00000600659 TFIP11Q9UBB9 837 aaKnown RBP17.42■□□□□ 0.38
RPS28-203ENST00000600659 USP20Q9Y2K6 914 aa17.42■□□□□ 0.38
RPS28-203ENST00000600659 RWDD3Q9Y3V2 267 aa17.42■□□□□ 0.38
RPS28-203ENST00000600659 A0A087X0B3 334 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 NPHP3-ACAD11A0A0J9YXS1 232 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 A0A1B0GUA9 196 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 HOXA2O43364 376 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 B4GALT3O60512 393 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 NPTX2P47972 431 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 AFF1P51825 1210 aaKnown RBP17.41■□□□□ 0.38
RPS28-203ENST00000600659 GPM6BQ13491 265 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 LONRF3Q496Y0 759 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 NOTUMQ6P988 496 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 RNF169Q8NCN4 708 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 RAD54LQ92698 747 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 P2RX5Q93086 422 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 CCDC51Q96ER9 411 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 CDK5RAP3Q96JB5 506 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 PRIMPOLQ96LW4 560 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 PLVAPQ9BX97 442 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 ARHGAP28Q9P2N2 729 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 IPPQ9Y573 584 aa17.41■□□□□ 0.38
RPS28-203ENST00000600659 PPP6R2O75170 966 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 OFD1O75665 1012 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 YEATS4O95619 227 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 ITGB1P05556 798 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 NCLP19338 710 aaKnown RBP17.4■□□□□ 0.38
RPS28-203ENST00000600659 DNAJB1P25685 340 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 PEX3P56589 373 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 CACNB1Q02641 598 aaPredicted RBP17.4■□□□□ 0.38
RPS28-203ENST00000600659 RAD51AP2Q09MP3 1159 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 MCM6Q14566 821 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 PPP2R5AQ15172 486 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 ZBTB8OSQ8IWT0 167 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 LRRC43Q8N309 656 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 KRI1Q8N9T8 703 aaKnown RBP17.4■□□□□ 0.38
RPS28-203ENST00000600659 COLGALT1Q8NBJ5 622 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 MRPL38Q96DV4 380 aaKnown RBP17.4■□□□□ 0.38
RPS28-203ENST00000600659 CALML4Q96GE6 196 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 CHAMP1Q96JM3 812 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 C11orf84Q9BUA3 381 aaPredicted RBP17.4■□□□□ 0.38
RPS28-203ENST00000600659 TIPINQ9BVW5 301 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 C2orf40Q9H1Z8 148 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 RNF39Q9H2S5 420 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 PRMT7Q9NVM4 692 aaPredicted RBP17.4■□□□□ 0.38
RPS28-203ENST00000600659 KCND2Q9NZV8 630 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 HES2Q9Y543 173 aa17.4■□□□□ 0.38
RPS28-203ENST00000600659 SFI1A8K8P3 1242 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 ACKR2O00590 384 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 SPTLC2O15270 562 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 INPPL1O15357 1258 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 GTPBP6O43824 516 aaPredicted RBP17.39■□□□□ 0.37
RPS28-203ENST00000600659 SSBP05455 408 aaKnown RBP eCLIP17.39■□□□□ 0.37
RPS28-203ENST00000600659 PRKCBP05771 671 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 SKIP12755 728 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 STK38Q15208 465 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 CCDC85BQ15834 202 aaPredicted RBP17.39■□□□□ 0.37
RPS28-203ENST00000600659 AXDND1Q5T1B0 1012 aaPredicted RBP17.39■□□□□ 0.37
RPS28-203ENST00000600659 KLHL23Q8NBE8 558 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 SPPL3Q8TCT6 385 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 DRC1Q96MC2 740 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 REEP2Q9BRK0 252 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 NXF3Q9H4D5 531 aaKnown RBP17.39■□□□□ 0.37
RPS28-203ENST00000600659 PDZD7Q9H5P4 517 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 C17orf75Q9HAS0 396 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 PLAGL2Q9UPG8 496 aa17.39■□□□□ 0.37
RPS28-203ENST00000600659 PHLPP2Q6ZVD8 1323 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 PBX3P40426 434 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 ZNF131P52739 623 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 MAPK6Q16659 721 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 FOXD4L6Q3SYB3 417 aaPredicted RBP17.38■□□□□ 0.37
RPS28-203ENST00000600659 NT5DC1Q5TFE4 455 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 EEF1DP3Q658K8 133 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 SLC27A1Q6PCB7 646 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 FOXD4L3Q6VB84 417 aaPredicted RBP17.38■□□□□ 0.37
RPS28-203ENST00000600659 MICALL1Q8N3F8 863 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 DEPTORQ8TB45 409 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 SPIRE2Q8WWL2 714 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 PPM1EQ8WY54 764 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 LARP4BQ92615 738 aaKnown RBP17.38■□□□□ 0.37
RPS28-203ENST00000600659 KCNN1Q92952 543 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 IFT74Q96LB3 600 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 ZNF396Q96N95 335 aaPredicted RBP17.38■□□□□ 0.37
RPS28-203ENST00000600659 FIZ1Q96SL8 496 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 NTPCRQ9BSD7 190 aaKnown RBP17.38■□□□□ 0.37
RPS28-203ENST00000600659 RSAD1Q9HA92 442 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 ALG13Q9NP73 1137 aaKnown RBP17.38■□□□□ 0.37
RPS28-203ENST00000600659 TBC1D13Q9NVG8 400 aa17.38■□□□□ 0.37
RPS28-203ENST00000600659 CITO14578 2027 aa17.37■□□□□ 0.37
RPS28-203ENST00000600659 ABLIM1O14639 778 aa17.37■□□□□ 0.37
RPS28-203ENST00000600659 NPTXRO95502 500 aa17.37■□□□□ 0.37
RPS28-203ENST00000600659 PLS3P13797 630 aa17.37■□□□□ 0.37
RPS28-203ENST00000600659 DDIT3P35638 169 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms