RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 UBN1Q9NPG3 1134 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 FAM105AQ9NUU6 356 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 SEL1LQ9UBV2 794 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 RWDD3Q9Y3V2 267 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 CNTNAP2Q9UHC6 1331 aa14.33□□□□□ -0.12
SRRM1-223ENST00000600523 NPHP3-ACAD11A0A0J9YXS1 232 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 A0A1W2PQ27 194 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 A0A1W2PQ64 194 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 A0A1W2PQD8 194 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 ACKR2O00590 384 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 TRAK2O60296 914 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 DGKIO75912 1065 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 IDEP14735 1019 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 FAM189BP81408 668 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 GIT2Q14161 759 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 TPRNQ4KMQ1 711 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 ARSHQ5FYA8 562 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 SLC27A1Q6PCB7 646 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 GLB1LQ6UWU2 654 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 STXBP4Q6ZWJ1 553 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 DYMQ7RTS9 669 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 ECHDC2Q86YB7 292 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 CCDC65Q8IXS2 484 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 CMTR2Q8IYT2 770 aaKnown RBP14.32□□□□□ -0.12
SRRM1-223ENST00000600523 DEFB123Q8N688 67 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 MRPS27Q92552 414 aaKnown RBP14.32□□□□□ -0.12
SRRM1-223ENST00000600523 DDX12PQ92771 950 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 IPO9Q96P70 1041 aaKnown RBP14.32□□□□□ -0.12
SRRM1-223ENST00000600523 MRPL4Q9BYD3 311 aaKnown RBP14.32□□□□□ -0.12
SRRM1-223ENST00000600523 FZD8Q9H461 694 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 YBX2Q9Y2T7 364 aaKnown RBP14.32□□□□□ -0.12
SRRM1-223ENST00000600523 PCDHB2Q9Y5E7 798 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 ADGRA3Q8IWK6 1321 aa14.32□□□□□ -0.12
SRRM1-223ENST00000600523 A0A1B0GUA9 196 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 K7ENM7 598 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 SLC16A4O15374 487 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 ZNF623O75123 536 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 MYOGP15173 224 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 ARF4P18085 180 aaPredicted RBP14.31□□□□□ -0.12
SRRM1-223ENST00000600523 SYKP43405 635 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 CACNB1Q02641 598 aaPredicted RBP14.31□□□□□ -0.12
SRRM1-223ENST00000600523 MAPK7Q13164 816 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 NAALADL2Q58DX5 795 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 SPOUT1Q5T280 376 aaKnown RBP14.31□□□□□ -0.12
SRRM1-223ENST00000600523 DAW1Q8N136 415 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 FSIP1Q8NA03 581 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 URGCPQ8TCY9 931 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 BICD1Q96G01 975 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 CPB2Q96IY4 423 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 TCHPQ9BT92 498 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 KIFC3Q9BVG8 833 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 MRPL9Q9BYD2 267 aaKnown RBP14.31□□□□□ -0.12
SRRM1-223ENST00000600523 TMEM117Q9H0C3 514 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 GDPD2Q9HCC8 539 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 AAASQ9NRG9 546 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 ARHGAP28Q9P2N2 729 aa14.31□□□□□ -0.12
SRRM1-223ENST00000600523 A0A1B0GVL5 298 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 CARNS1A5YM72 827 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 MYMKA6NI61 221 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 TBKBP1A7MCY6 615 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 SLFN14P0C7P3 912 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 ITGA4P13612 1032 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 PFKFB1P16118 471 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 HOXA11P31270 313 aaPredicted RBP14.3□□□□□ -0.12
SRRM1-223ENST00000600523 ZNF131P52739 623 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 DCAF4L1Q3SXM0 396 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 HERC4Q5GLZ8 1057 aaPredicted RBP14.3□□□□□ -0.12
SRRM1-223ENST00000600523 ATF7IP2Q5U623 682 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 KANK3Q6NY19 840 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 HAUS6Q7Z4H7 955 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 CCDC47Q96A33 483 aaKnown RBP14.3□□□□□ -0.12
SRRM1-223ENST00000600523 TGS1Q96RS0 853 aaKnown RBP14.3□□□□□ -0.12
SRRM1-223ENST00000600523 GAS2L1Q99501 681 aaPredicted RBP14.3□□□□□ -0.12
SRRM1-223ENST00000600523 CCDC113Q9H0I3 377 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 SEMA6BQ9H3T3 888 aa14.3□□□□□ -0.12
SRRM1-223ENST00000600523 MRPL44Q9H9J2 332 aaKnown RBP14.3□□□□□ -0.12
SRRM1-223ENST00000600523 A0A087X0B3 334 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 B4GALT5O43286 388 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 MYL1P05976 194 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 MAPTP10636 758 aaKnown RBP14.29□□□□□ -0.12
SRRM1-223ENST00000600523 MATR3P43243 847 aaKnown RBP eCLIP14.29□□□□□ -0.12
SRRM1-223ENST00000600523 ASIC1P78348 528 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 TAP1Q03518 808 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 ALCAMQ13740 583 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 E2F4Q16254 413 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 AMHR2Q16671 573 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 PAN2Q504Q3 1202 aaKnown RBP14.29□□□□□ -0.12
SRRM1-223ENST00000600523 LRRC43Q8N309 656 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 TMEM161BQ8NDZ6 487 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
SRRM1-223ENST00000600523 LRRC15Q8TF66 581 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 HVCN1Q96D96 273 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 CHAMP1Q96JM3 812 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 FAM161BQ96MY7 647 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 PANK4Q9NVE7 773 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 KBTBD4Q9NVX7 518 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 KANSL3Q9P2N6 904 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 HOOK1Q9UJC3 728 aaKnown RBP14.29□□□□□ -0.12
SRRM1-223ENST00000600523 EXOC7Q9UPT5 735 aa14.29□□□□□ -0.12
SRRM1-223ENST00000600523 PCDHB13Q9Y5F0 798 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms