RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ZSCAN23	Q3MJ62	389 aa		24.17	■■□□□ 1.46
LTBP4-227	ENST00000600026	CATSPER4	Q7RTX7	472 aa		24.17	■■□□□ 1.46
LTBP4-227	ENST00000600026	SPIRE2	Q8WWL2	714 aa		24.17	■■□□□ 1.46
LTBP4-227	ENST00000600026	KMT5A	Q9NQR1	393 aa		24.17	■■□□□ 1.46
LTBP4-227	ENST00000600026	MAN1B1	Q9UKM7	699 aa		24.17	■■□□□ 1.46
LTBP4-227	ENST00000600026	ZBBX	A8MT70	800 aa		24.16	■■□□□ 1.46
LTBP4-227	ENST00000600026	BIN1	O00499	593 aa		24.16	■■□□□ 1.46
LTBP4-227	ENST00000600026	SMTN	P53814	917 aa		24.16	■■□□□ 1.46
LTBP4-227	ENST00000600026	IKBKE	Q14164	716 aa		24.16	■■□□□ 1.46
LTBP4-227	ENST00000600026	SFR1	Q86XK3	245 aa		24.16	■■□□□ 1.46
LTBP4-227	ENST00000600026	SLC17A8	Q8NDX2	589 aa		24.16	■■□□□ 1.46
LTBP4-227	ENST00000600026	LINC01599	Q8WXQ3	324 aa		24.16	■■□□□ 1.46
LTBP4-227	ENST00000600026	GZF1	Q9H116	711 aa	Predicted RBP	24.16	■■□□□ 1.46
LTBP4-227	ENST00000600026	PHLPP2	Q6ZVD8	1323 aa		24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	ABHD14A-ACY1	A0A1B0GW23	586 aa		24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	SYCE3	A1L190	88 aa		24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	MGEA5	O60502	916 aa		24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	FAM26F	Q5R3K3	315 aa		24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	FAM178B	Q8IXR5	827 aa		24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	RNPC3	Q96LT9	517 aa	Known RBP	24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	FTHL17	Q9BXU8	183 aa		24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	CCDC113	Q9H0I3	377 aa		24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	MTIF3	Q9H2K0	278 aa	Known RBP	24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	OLFML3	Q9NRN5	406 aa		24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	CXXC1	Q9P0U4	656 aa	Predicted RBP	24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	ARHGAP28	Q9P2N2	729 aa		24.15	■■□□□ 1.46
LTBP4-227	ENST00000600026	SLC16A4	O15374	487 aa		24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	EFCAB14	O75071	495 aa		24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	ERLIN2	O94905	339 aa		24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	NCKAP1L	P55160	1127 aa		24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	EHHADH	Q08426	723 aa		24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	MORC3	Q14149	939 aa		24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	AMHR2	Q16671	573 aa		24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	ZNF658	Q5TYW1	1059 aa	Predicted RBP	24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	RASIP1	Q5U651	963 aa		24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	ISM2	Q6H9L7	571 aa		24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	TDH	Q8IZJ6	230 aa		24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	NTPCR	Q9BSD7	190 aa	Known RBP	24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	MRPL44	Q9H9J2	332 aa	Known RBP	24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	AGPAT5	Q9NUQ2	364 aa		24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	PRMT7	Q9NVM4	692 aa	Predicted RBP	24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	PIN4	Q9Y237	131 aa	Known RBP	24.14	■■□□□ 1.45
LTBP4-227	ENST00000600026	GBF1	Q92538	1859 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026		H0YCG3	227 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026		K7ENM7	598 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	TSPAN1	O60635	241 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	PRKCB	P05771	671 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	MAPT	P10636	758 aa	Known RBP	24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	EFNA5	P52803	228 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	NLRP12	P59046	1061 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	WDR5	P61964	334 aa	Known RBP	24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	DSC3	Q14574	896 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	PCBP1	Q15365	356 aa	Known RBP eCLIP	24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	PPP4R3CP	Q6ZMV5	832 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	STXBP4	Q6ZWJ1	553 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	TMEM161B	Q8NDZ6	487 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	FIZ1	Q96SL8	496 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	FZD8	Q9H461	694 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	TBC1D7	Q9P0N9	293 aa		24.13	■■□□□ 1.45
LTBP4-227	ENST00000600026	SOX1	O00570	391 aa	Predicted RBP	24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	EDN1	P05305	212 aa		24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	CCDC192	P0DO97	292 aa		24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	KCNJ6	P48051	423 aa		24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	MAPK6	Q16659	721 aa		24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	FAM187B	Q17R55	369 aa		24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	FAM43B	Q6ZT52	329 aa	Predicted RBP	24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	RTN4RL1	Q86UN2	441 aa	Predicted RBP	24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	PRIMPOL	Q96LW4	560 aa		24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	ADAM2	Q99965	735 aa		24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	TSPYL2	Q9H2G4	693 aa	Predicted RBP	24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	TMEM134	Q9H6X4	195 aa		24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	SLC39A2	Q9NP94	309 aa		24.12	■■□□□ 1.45
LTBP4-227	ENST00000600026	DENND3	A2RUS2	1198 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	ENPP3	O14638	875 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	B4GALT5	O43286	388 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	KIF20A	O95235	890 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	SCP2	P22307	547 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	NMT1	P30419	496 aa	Known RBP	24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	ABCD1	P33897	745 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	DEFB103A	P81534	67 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	ALCAM	Q13740	583 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	STX1A	Q16623	288 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	TAS1R3	Q7RTX0	852 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	HPS3	Q969F9	1004 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	CHST12	Q9NRB3	414 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	ANO10	Q9NW15	660 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	PCDHB13	Q9Y5F0	798 aa		24.11	■■□□□ 1.45
LTBP4-227	ENST00000600026	CNTNAP2	Q9UHC6	1331 aa		24.1	■■□□□ 1.45
LTBP4-227	ENST00000600026	TTC3	P53804	2025 aa		24.1	■■□□□ 1.45
LTBP4-227	ENST00000600026		K7ERI5	159 aa		24.1	■■□□□ 1.45
LTBP4-227	ENST00000600026	GCNT3	O95395	438 aa		24.1	■■□□□ 1.45
LTBP4-227	ENST00000600026	ZSCAN20	P17040	1043 aa	Predicted RBP	24.1	■■□□□ 1.45
LTBP4-227	ENST00000600026	ARF4	P18085	180 aa	Predicted RBP	24.1	■■□□□ 1.45
LTBP4-227	ENST00000600026	AXL	P30530	894 aa		24.1	■■□□□ 1.45
LTBP4-227	ENST00000600026	PPP1R2	P41236	205 aa		24.1	■■□□□ 1.45
LTBP4-227	ENST00000600026	TYRO3	Q06418	890 aa		24.1	■■□□□ 1.45
LTBP4-227	ENST00000600026	STK4	Q13043	487 aa		24.1	■■□□□ 1.45
LTBP4-227	ENST00000600026	STIM1	Q13586	685 aa		24.1	■■□□□ 1.45

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms