RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 OFD1O75665 1012 aa25.01■■□□□ 1.59
CCDC9-204ENST00000599398 ARF4P18085 180 aaPredicted RBP25.01■■□□□ 1.59
CCDC9-204ENST00000599398 PPM1AP35813 382 aa25.01■■□□□ 1.59
CCDC9-204ENST00000599398 HYAL1Q12794 435 aa25.01■■□□□ 1.59
CCDC9-204ENST00000599398 AMHR2Q16671 573 aa25.01■■□□□ 1.59
CCDC9-204ENST00000599398 ARL6IP4Q66PJ3 421 aaKnown RBP25.01■■□□□ 1.59
CCDC9-204ENST00000599398 AGMOQ6ZNB7 445 aa25.01■■□□□ 1.59
CCDC9-204ENST00000599398 MRPL10Q7Z7H8 261 aaKnown RBP25.01■■□□□ 1.59
CCDC9-204ENST00000599398 URGCPQ8TCY9 931 aa25.01■■□□□ 1.59
CCDC9-204ENST00000599398 BSNDQ8WZ55 320 aa25.01■■□□□ 1.59
CCDC9-204ENST00000599398 INTS4Q96HW7 963 aaKnown RBP25.01■■□□□ 1.59
CCDC9-204ENST00000599398 UHRF1Q96T88 793 aaPredicted RBP25.01■■□□□ 1.59
CCDC9-204ENST00000599398 MMTAG2Q9BU76 263 aaKnown RBP25.01■■□□□ 1.59
CCDC9-204ENST00000599398 EIF2AQ9BY44 585 aaKnown RBP25.01■■□□□ 1.59
CCDC9-204ENST00000599398 TRIM6Q9C030 488 aaPredicted RBP25.01■■□□□ 1.59
CCDC9-204ENST00000599398 RSAD1Q9HA92 442 aa25.01■■□□□ 1.59
CCDC9-204ENST00000599398 SPG21Q9NZD8 308 aa25.01■■□□□ 1.59
CCDC9-204ENST00000599398 PUF60Q9UHX1 559 aaKnown RBP25.01■■□□□ 1.59
CCDC9-204ENST00000599398 PCDHGC5Q9Y5F6 944 aa25.01■■□□□ 1.59
CCDC9-204ENST00000599398 EYA4O95677 639 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 ITGA4P13612 1032 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 GTF2F1P35269 517 aaKnown RBP eCLIP25■■□□□ 1.59
CCDC9-204ENST00000599398 ALDH7A1P49419 539 aaKnown RBP25■■□□□ 1.59
CCDC9-204ENST00000599398 KRT17Q04695 432 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 ADGRD2Q7Z7M1 963 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 CNNM3Q8NE01 707 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 DEPTORQ8TB45 409 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 MRPS27Q92552 414 aaKnown RBP25■■□□□ 1.59
CCDC9-204ENST00000599398 IFT74Q96LB3 600 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 GBP3Q9H0R5 595 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 CSRNP2Q9H175 543 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 C2orf40Q9H1Z8 148 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 TBC1D13Q9NVG8 400 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 IPPQ9Y573 584 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 CNTNAP2Q9UHC6 1331 aa25■■□□□ 1.59
CCDC9-204ENST00000599398 NT5C1B-RDH14C9J2C7 533 aa24.99■■□□□ 1.59
CCDC9-204ENST00000599398 H3BQ06 376 aaPredicted RBP24.99■■□□□ 1.59
CCDC9-204ENST00000599398 LIG1P18858 919 aa24.99■■□□□ 1.59
CCDC9-204ENST00000599398 NCLP19338 710 aaKnown RBP24.99■■□□□ 1.59
CCDC9-204ENST00000599398 SYT1P21579 422 aa24.99■■□□□ 1.59
CCDC9-204ENST00000599398 NAMPTP43490 491 aa24.99■■□□□ 1.59
CCDC9-204ENST00000599398 BCAR1P56945 870 aa24.99■■□□□ 1.59
CCDC9-204ENST00000599398 PLCB3Q01970 1234 aa24.99■■□□□ 1.59
CCDC9-204ENST00000599398 PPP2R5AQ15172 486 aa24.99■■□□□ 1.59
CCDC9-204ENST00000599398 TMEM132AQ24JP5 1023 aa24.99■■□□□ 1.59
CCDC9-204ENST00000599398 LEXMQ3ZCV2 418 aa24.99■■□□□ 1.59
CCDC9-204ENST00000599398 CDCA2Q69YH5 1023 aaPredicted RBP24.99■■□□□ 1.59
CCDC9-204ENST00000599398 RBM23Q86U06 439 aaKnown RBP24.99■■□□□ 1.59
CCDC9-204ENST00000599398 CDR2LQ86X02 465 aaPredicted RBP24.99■■□□□ 1.59
CCDC9-204ENST00000599398 SMG8Q8ND04 991 aaKnown RBP24.99■■□□□ 1.59
CCDC9-204ENST00000599398 KIFAP3Q92845 792 aa24.99■■□□□ 1.59
CCDC9-204ENST00000599398 CDK5RAP3Q96JB5 506 aa24.99■■□□□ 1.59
CCDC9-204ENST00000599398 PRMT7Q9NVM4 692 aaPredicted RBP24.99■■□□□ 1.59
CCDC9-204ENST00000599398 BMP15O95972 392 aa24.98■■□□□ 1.59
CCDC9-204ENST00000599398 ERVFC1P60507 584 aa24.98■■□□□ 1.59
CCDC9-204ENST00000599398 KCNK18Q7Z418 384 aa24.98■■□□□ 1.59
CCDC9-204ENST00000599398 SLC39A11Q8N1S5 342 aa24.98■■□□□ 1.59
CCDC9-204ENST00000599398 NECAB3Q96P71 396 aaPredicted RBP24.98■■□□□ 1.59
CCDC9-204ENST00000599398 PLIN2Q99541 437 aa24.98■■□□□ 1.59
CCDC9-204ENST00000599398 APOL6Q9BWW8 343 aa24.98■■□□□ 1.59
CCDC9-204ENST00000599398 LZTS1Q9Y250 596 aa24.98■■□□□ 1.59
CCDC9-204ENST00000599398 HES2Q9Y543 173 aa24.98■■□□□ 1.59
CCDC9-204ENST00000599398 NPTXRO95502 500 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 SSBP05455 408 aaKnown RBP eCLIP24.97■■□□□ 1.59
CCDC9-204ENST00000599398 NRIP1P48552 1158 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 COL19A1Q14993 1142 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 SF3A1Q15459 793 aaKnown RBP24.97■■□□□ 1.59
CCDC9-204ENST00000599398 PLPP4Q5VZY2 271 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 SLC27A1Q6PCB7 646 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 PPP4R3CPQ6ZMV5 832 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 HACE1Q8IYU2 909 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 PRIMPOLQ96LW4 560 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 NT5C3AQ9H0P0 336 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 NRDE2Q9H7Z3 1164 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 TLE6Q9H808 572 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 UBN1Q9NPG3 1134 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 ENTPD7Q9NQZ7 604 aa24.97■■□□□ 1.59
CCDC9-204ENST00000599398 PRKCBP05771 671 aa24.96■■□□□ 1.59
CCDC9-204ENST00000599398 MAPK6Q16659 721 aa24.96■■□□□ 1.59
CCDC9-204ENST00000599398 PDE12Q6L8Q7 609 aaKnown RBP24.96■■□□□ 1.59
CCDC9-204ENST00000599398 CABP7Q86V35 215 aa24.96■■□□□ 1.59
CCDC9-204ENST00000599398 TMEM169Q96HH4 297 aa24.96■■□□□ 1.59
CCDC9-204ENST00000599398 PNMA5Q96PV4 448 aa24.96■■□□□ 1.59
CCDC9-204ENST00000599398 FAM193BQ96PV7 902 aaPredicted RBP24.96■■□□□ 1.59
CCDC9-204ENST00000599398 TCF25Q9BQ70 676 aa24.96■■□□□ 1.59
CCDC9-204ENST00000599398 KIFC3Q9BVG8 833 aa24.96■■□□□ 1.59
CCDC9-204ENST00000599398 RUSC1Q9BVN2 902 aa24.96■■□□□ 1.59
CCDC9-204ENST00000599398 RNF39Q9H2S5 420 aa24.96■■□□□ 1.59
CCDC9-204ENST00000599398 FZD8Q9H461 694 aa24.96■■□□□ 1.59
CCDC9-204ENST00000599398 KANSL3Q9P2N6 904 aa24.96■■□□□ 1.59
CCDC9-204ENST00000599398 A0A1B0GUA9 196 aa24.95■■□□□ 1.58
CCDC9-204ENST00000599398 LINC01565O15544 149 aa24.95■■□□□ 1.58
CCDC9-204ENST00000599398 POMCP01189 267 aa24.95■■□□□ 1.58
CCDC9-204ENST00000599398 AFF1P51825 1210 aaKnown RBP24.95■■□□□ 1.58
CCDC9-204ENST00000599398 PRPF4BQ13523 1007 aaKnown RBP24.95■■□□□ 1.58
CCDC9-204ENST00000599398 FAM187BQ17R55 369 aa24.95■■□□□ 1.58
CCDC9-204ENST00000599398 CTC1Q2NKJ3 1217 aa24.95■■□□□ 1.58
CCDC9-204ENST00000599398 HYIQ5T013 277 aa24.95■■□□□ 1.58
CCDC9-204ENST00000599398 PTCRAQ6ISU1 281 aaPredicted RBP24.95■■□□□ 1.58
CCDC9-204ENST00000599398 RINT1Q6NUQ1 792 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms