RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 KANSL3Q9P2N6 904 aa25.57■■□□□ 1.68
SSBP4-205ENST00000598159 BDP1A6H8Y1 2624 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 MEIS3P2A8K0S8 358 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 PI4K2BG5E9Z4 385 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 INO80B-WBP1J3KQ70 363 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 NCLP19338 710 aaKnown RBP25.56■■□□□ 1.68
SSBP4-205ENST00000598159 GLRA2P23416 452 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 RNASELQ05823 741 aaKnown RBP25.56■■□□□ 1.68
SSBP4-205ENST00000598159 CAPSQ13938 189 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 PDIA5Q14554 519 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 PLPP4Q5VZY2 271 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 NOTUMQ6P988 496 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 MCPH1Q8NEM0 835 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 URGCPQ8TCY9 931 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 CCDC51Q96ER9 411 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 TMEM169Q96HH4 297 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 NRDE2Q9H7Z3 1164 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 INPP5FQ9Y2H2 1132 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 CNTNAP2Q9UHC6 1331 aa25.56■■□□□ 1.68
SSBP4-205ENST00000598159 NT5C1B-RDH14C9J2C7 533 aa25.55■■□□□ 1.68
SSBP4-205ENST00000598159 USO1O60763 962 aaKnown RBP25.55■■□□□ 1.68
SSBP4-205ENST00000598159 ZC3H11AO75152 810 aaKnown RBP eCLIP25.55■■□□□ 1.68
SSBP4-205ENST00000598159 GLP2RO95838 553 aa25.55■■□□□ 1.68
SSBP4-205ENST00000598159 FXR2P51116 673 aaKnown RBP eCLIP25.55■■□□□ 1.68
SSBP4-205ENST00000598159 HAUS3Q68CZ6 603 aa25.55■■□□□ 1.68
SSBP4-205ENST00000598159 TMEM184AQ6ZMB5 413 aa25.55■■□□□ 1.68
SSBP4-205ENST00000598159 POLR3FQ9H1D9 316 aaPredicted RBP25.55■■□□□ 1.68
SSBP4-205ENST00000598159 RSAD1Q9HA92 442 aa25.55■■□□□ 1.68
SSBP4-205ENST00000598159 STK24Q9Y6E0 443 aa25.55■■□□□ 1.68
SSBP4-205ENST00000598159 C19orf67A6NJJ6 358 aa25.54■■□□□ 1.68
SSBP4-205ENST00000598159 TSPAN1O60635 241 aa25.54■■□□□ 1.68
SSBP4-205ENST00000598159 GALTP07902 379 aa25.54■■□□□ 1.68
SSBP4-205ENST00000598159 SRGAP2BP0DMP2 458 aa25.54■■□□□ 1.68
SSBP4-205ENST00000598159 MCM2P49736 904 aa25.54■■□□□ 1.68
SSBP4-205ENST00000598159 ZP2Q05996 745 aa25.54■■□□□ 1.68
SSBP4-205ENST00000598159 MBTD1Q05BQ5 628 aa25.54■■□□□ 1.68
SSBP4-205ENST00000598159 SMC1AQ14683 1233 aaKnown RBP25.54■■□□□ 1.68
SSBP4-205ENST00000598159 MRPL43Q8N983 215 aaKnown RBP25.54■■□□□ 1.68
SSBP4-205ENST00000598159 SMRP1Q8NCR6 262 aa25.54■■□□□ 1.68
SSBP4-205ENST00000598159 TMX3Q96JJ7 454 aa25.54■■□□□ 1.68
SSBP4-205ENST00000598159 CSRNP2Q9H175 543 aa25.54■■□□□ 1.68
SSBP4-205ENST00000598159 ITGA4P13612 1032 aa25.53■■□□□ 1.68
SSBP4-205ENST00000598159 TOB1P50616 345 aaPredicted RBP25.53■■□□□ 1.68
SSBP4-205ENST00000598159 MAEAQ7L5Y9 396 aa25.53■■□□□ 1.68
SSBP4-205ENST00000598159 KHSRPQ92945 711 aaKnown RBP eCLIP25.53■■□□□ 1.68
SSBP4-205ENST00000598159 IGSF21Q96ID5 467 aa25.53■■□□□ 1.68
SSBP4-205ENST00000598159 FAM193BQ96PV7 902 aaPredicted RBP25.53■■□□□ 1.68
SSBP4-205ENST00000598159 POP1Q99575 1024 aaKnown RBP25.53■■□□□ 1.68
SSBP4-205ENST00000598159 RAB34Q9BZG1 259 aa25.53■■□□□ 1.68
SSBP4-205ENST00000598159 LRWD1Q9UFC0 647 aa25.53■■□□□ 1.68
SSBP4-205ENST00000598159 BARX2Q9UMQ3 279 aaPredicted RBP25.53■■□□□ 1.68
SSBP4-205ENST00000598159 HIDE1A8MVS5 230 aa25.52■■□□□ 1.68
SSBP4-205ENST00000598159 LAD1O00515 517 aa25.52■■□□□ 1.68
SSBP4-205ENST00000598159 ALDH2P05091 517 aa25.52■■□□□ 1.68
SSBP4-205ENST00000598159 PTGDRQ13258 359 aa25.52■■□□□ 1.68
SSBP4-205ENST00000598159 KCNC3Q14003 757 aa25.52■■□□□ 1.68
SSBP4-205ENST00000598159 AMHR2Q16671 573 aa25.52■■□□□ 1.68
SSBP4-205ENST00000598159 DDX53Q86TM3 631 aaKnown RBP25.52■■□□□ 1.68
SSBP4-205ENST00000598159 SMG8Q8ND04 991 aaKnown RBP25.52■■□□□ 1.68
SSBP4-205ENST00000598159 CPB2Q96IY4 423 aa25.52■■□□□ 1.68
SSBP4-205ENST00000598159 IPPQ9Y573 584 aa25.52■■□□□ 1.68
SSBP4-205ENST00000598159 PCDHB6Q9Y5E3 794 aa25.52■■□□□ 1.68
SSBP4-205ENST00000598159 ARHGEF35A5YM69 484 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 CXCL14O95715 111 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 ALADP13716 330 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 CYP11B2P19099 503 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 CCT6AP40227 531 aaKnown RBP25.51■■□□□ 1.67
SSBP4-205ENST00000598159 GIT2Q14161 759 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 NBR1Q14596 966 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 POTEGQ6S5H5 508 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 PADI6Q6TGC4 694 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 ZNF280BQ86YH2 543 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 VPS52Q8N1B4 723 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 TMEM175Q9BSA9 504 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 GBP3Q9H0R5 595 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 GPRC5CQ9NQ84 441 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 STK39Q9UEW8 545 aa25.51■■□□□ 1.67
SSBP4-205ENST00000598159 C2orf71A6NGG8 1288 aa25.5■■□□□ 1.67
SSBP4-205ENST00000598159 LRRIQ4A6NIV6 560 aa25.5■■□□□ 1.67
SSBP4-205ENST00000598159 ARF4P18085 180 aaPredicted RBP25.5■■□□□ 1.67
SSBP4-205ENST00000598159 HACE1Q8IYU2 909 aa25.5■■□□□ 1.67
SSBP4-205ENST00000598159 IGSF22Q8N9C0 903 aa25.5■■□□□ 1.67
SSBP4-205ENST00000598159 VN1R2Q8NFZ6 395 aa25.5■■□□□ 1.67
SSBP4-205ENST00000598159 EIF2AQ9BY44 585 aaKnown RBP25.5■■□□□ 1.67
SSBP4-205ENST00000598159 DNAJB4Q9UDY4 337 aa25.5■■□□□ 1.67
SSBP4-205ENST00000598159 FAN1Q9Y2M0 1017 aa25.5■■□□□ 1.67
SSBP4-205ENST00000598159 A0A1B0GUA9 196 aa25.49■■□□□ 1.67
SSBP4-205ENST00000598159 GPR37L1O60883 481 aa25.49■■□□□ 1.67
SSBP4-205ENST00000598159 DDHD2O94830 711 aa25.49■■□□□ 1.67
SSBP4-205ENST00000598159 COL9A1P20849 921 aa25.49■■□□□ 1.67
SSBP4-205ENST00000598159 SLC11A1P49279 550 aa25.49■■□□□ 1.67
SSBP4-205ENST00000598159 MCTP1Q6DN14 999 aa25.49■■□□□ 1.67
SSBP4-205ENST00000598159 ZBTB8OSQ8IWT0 167 aa25.49■■□□□ 1.67
SSBP4-205ENST00000598159 PRIMPOLQ96LW4 560 aa25.49■■□□□ 1.67
SSBP4-205ENST00000598159 TRIM6Q9C030 488 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-205ENST00000598159 PRMT7Q9NVM4 692 aaPredicted RBP25.49■■□□□ 1.67
SSBP4-205ENST00000598159 IRAK3Q9Y616 596 aa25.49■■□□□ 1.67
SSBP4-205ENST00000598159 INPPL1O15357 1258 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 POMCP01189 267 aa25.48■■□□□ 1.67
SSBP4-205ENST00000598159 CTSAP10619 480 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms