RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 SERINC5Q86VE9 423 aa16.06■□□□□ 0.16
VRK3-212ENST00000596814 NME8Q8N427 588 aa16.06■□□□□ 0.16
VRK3-212ENST00000596814 CNOT6LQ96LI5 555 aaKnown RBP16.06■□□□□ 0.16
VRK3-212ENST00000596814 INO80BQ9C086 356 aaPredicted RBP16.06■□□□□ 0.16
VRK3-212ENST00000596814 PRDM10Q9NQV6 1147 aa16.06■□□□□ 0.16
VRK3-212ENST00000596814 BRCA2P51587 3418 aa16.06■□□□□ 0.16
VRK3-212ENST00000596814 KCNJ18B7U540 433 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 TISP43B9A030 160 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 GPR32O75388 356 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 PIGRP01833 764 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 RPLP2P05387 115 aaKnown RBP16.05■□□□□ 0.16
VRK3-212ENST00000596814 KCNJ12Q14500 433 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 TCP11X2Q5H9J9 407 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 ARMCX5Q6P1M9 558 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 RSPH3Q86UC2 560 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 IRF2BP1Q8IU81 584 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 C12orf56Q8IXR9 622 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 ZNF710Q8N1W2 664 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 SLC43A3Q8NBI5 491 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 ANKRD20A12PQ8NF67 263 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 MRPL4Q9BYD3 311 aaKnown RBP16.05■□□□□ 0.16
VRK3-212ENST00000596814 ADAMTS10Q9H324 1103 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 MINDY3Q9H8M7 445 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 NOD1Q9Y239 953 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 ANKRD63C9JTQ0 380 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 AP5Z1O43299 807 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 SERPINC1P01008 464 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 TFRCP02786 760 aaKnown RBP16.05■□□□□ 0.16
VRK3-212ENST00000596814 EDN1P05305 212 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 EEF1GP26641 437 aaKnown RBP16.05■□□□□ 0.16
VRK3-212ENST00000596814 CYP2J2P51589 502 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 FANCCQ00597 558 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 MYBPC2Q14324 1141 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 SLC39A4Q6P5W5 647 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 SRGAP1Q7Z6B7 1085 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 SLC9A9Q8IVB4 645 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 CTAGE1Q96RT6 745 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 CBWD1Q9BRT8 395 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 SEZ6LQ9BYH1 1024 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 GCOM2Q9BZD3 368 aaPredicted RBP16.05■□□□□ 0.16
VRK3-212ENST00000596814 FZD8Q9H461 694 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 TRMT13Q9NUP7 481 aaKnown RBP16.05■□□□□ 0.16
VRK3-212ENST00000596814 PRMT7Q9NVM4 692 aaPredicted RBP16.05■□□□□ 0.16
VRK3-212ENST00000596814 GINS2Q9Y248 185 aa16.05■□□□□ 0.16
VRK3-212ENST00000596814 ARVCFO00192 962 aa16.04■□□□□ 0.16
VRK3-212ENST00000596814 ACKR2O00590 384 aa16.04■□□□□ 0.16
VRK3-212ENST00000596814 GNA14O95837 355 aa16.04■□□□□ 0.16
VRK3-212ENST00000596814 FAM187BQ17R55 369 aa16.04■□□□□ 0.16
VRK3-212ENST00000596814 ZPBP2Q6X784 338 aa16.04■□□□□ 0.16
VRK3-212ENST00000596814 FILIP1Q7Z7B0 1213 aa16.04■□□□□ 0.16
VRK3-212ENST00000596814 CREBRFQ8IUR6 639 aa16.04■□□□□ 0.16
VRK3-212ENST00000596814 TMEM174Q8WUU8 243 aa16.04■□□□□ 0.16
VRK3-212ENST00000596814 ANP32BQ92688 251 aaKnown RBP16.04■□□□□ 0.16
VRK3-212ENST00000596814 OSMRQ99650 979 aa16.04■□□□□ 0.16
VRK3-212ENST00000596814 TARS2Q9BW92 718 aaKnown RBP16.04■□□□□ 0.16
VRK3-212ENST00000596814 DMAC2Q9NW81 257 aa16.04■□□□□ 0.16
VRK3-212ENST00000596814 USP20Q9Y2K6 914 aa16.04■□□□□ 0.16
VRK3-212ENST00000596814 M0QZ92 97 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 SLC16A3O15427 465 aaKnown RBP16.03■□□□□ 0.16
VRK3-212ENST00000596814 GARTP22102 1010 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 GJA8P48165 433 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 MRPS6P82932 125 aaKnown RBP16.03■□□□□ 0.16
VRK3-212ENST00000596814 PTK7Q13308 1070 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 PRPF4BQ13523 1007 aaKnown RBP16.03■□□□□ 0.16
VRK3-212ENST00000596814 KRT31Q15323 416 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 CCDC40Q4G0X9 1142 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 CEP135Q66GS9 1140 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 RPAINQ86UA6 219 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 POMGNT1Q8WZA1 660 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 WNT8BQ93098 351 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 PRIMPOLQ96LW4 560 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 TRIM5Q9C035 493 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 HSPBP1Q9NZL4 362 aa16.03■□□□□ 0.16
VRK3-212ENST00000596814 LIMA1Q9UHB6 759 aaKnown RBP16.03■□□□□ 0.16
VRK3-212ENST00000596814 EXOC3O60645 756 aa16.02■□□□□ 0.16
VRK3-212ENST00000596814 ERLIN2O94905 339 aa16.02■□□□□ 0.16
VRK3-212ENST00000596814 IQCF3P0C7M6 154 aa16.02■□□□□ 0.16
VRK3-212ENST00000596814 EPB41P11171 864 aaKnown RBP16.02■□□□□ 0.16
VRK3-212ENST00000596814 DARSP14868 501 aaKnown RBP16.02■□□□□ 0.16
VRK3-212ENST00000596814 ADSSP30520 456 aa16.02■□□□□ 0.16
VRK3-212ENST00000596814 MTIF2P46199 727 aaKnown RBP16.02■□□□□ 0.16
VRK3-212ENST00000596814 CRYBB1P53674 252 aaPredicted RBP16.02■□□□□ 0.16
VRK3-212ENST00000596814 TMEM132AQ24JP5 1023 aa16.02■□□□□ 0.16
VRK3-212ENST00000596814 XXYLT1Q8NBI6 393 aa16.02■□□□□ 0.16
VRK3-212ENST00000596814 PCIF1Q9H4Z3 704 aa16.02■□□□□ 0.16
VRK3-212ENST00000596814 IFNKQ9P0W0 207 aa16.02■□□□□ 0.16
VRK3-212ENST00000596814 ANKFY1Q9P2R3 1169 aa16.02■□□□□ 0.16
VRK3-212ENST00000596814 FRMD4BQ9Y2L6 1034 aa16.02■□□□□ 0.16
VRK3-212ENST00000596814 TRPV2Q9Y5S1 764 aa16.02■□□□□ 0.16
VRK3-212ENST00000596814 CNTNAP2Q9UHC6 1331 aa16.02■□□□□ 0.16
VRK3-212ENST00000596814 TTLL13PA6NNM8 815 aa16.02■□□□□ 0.15
VRK3-212ENST00000596814 B4GALT5O43286 388 aa16.02■□□□□ 0.15
VRK3-212ENST00000596814 B4GALT4O60513 344 aa16.02■□□□□ 0.15
VRK3-212ENST00000596814 CSDE1O75534 798 aaKnown RBP16.02■□□□□ 0.15
VRK3-212ENST00000596814 AKAP3O75969 853 aa16.02■□□□□ 0.15
VRK3-212ENST00000596814 ADCY5O95622 1261 aa16.02■□□□□ 0.15
VRK3-212ENST00000596814 CASP4P49662 377 aa16.02■□□□□ 0.15
VRK3-212ENST00000596814 MNX1P50219 401 aaPredicted RBP16.02■□□□□ 0.15
VRK3-212ENST00000596814 MARSP56192 900 aaKnown RBP16.02■□□□□ 0.15
VRK3-212ENST00000596814 UBASH3AP57075 661 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms