RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 EPHX3Q9H6B9 360 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 NRDE2Q9H7Z3 1164 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 DNAJB4Q9UDY4 337 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 DBR1Q9UK59 544 aaKnown RBP14.51□□□□□ -0.09
LIG1-212ENST00000596549 NOL7Q9UMY1 257 aaKnown RBP14.51□□□□□ -0.09
LIG1-212ENST00000596549 INPP5FQ9Y2H2 1132 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 B4GALT5O43286 388 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 XRCC6P12956 609 aaKnown RBP eCLIP14.5□□□□□ -0.09
LIG1-212ENST00000596549 ARF4P18085 180 aaPredicted RBP14.5□□□□□ -0.09
LIG1-212ENST00000596549 GJB2P29033 226 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 POU5F1BQ06416 359 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 SMAD2Q15796 467 aaKnown RBP14.5□□□□□ -0.09
LIG1-212ENST00000596549 NOMO2Q5JPE7 1267 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 GLB1LQ6UWU2 654 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 MAEAQ7L5Y9 396 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 MRPL10Q7Z7H8 261 aaKnown RBP14.5□□□□□ -0.09
LIG1-212ENST00000596549 SMRP1Q8NCR6 262 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 RSPH1Q8WYR4 309 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 BSNDQ8WZ55 320 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 RSAD1Q9HA92 442 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 ENTPD7Q9NQZ7 604 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 SPG21Q9NZD8 308 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 CD207Q9UJ71 328 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 IPPQ9Y573 584 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 TRIP11Q15643 1979 aa14.5□□□□□ -0.09
LIG1-212ENST00000596549 PP2D1A8MPX8 630 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 INO80B-WBP1J3KQ70 363 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 DDHD2O94830 711 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 EYA4O95677 639 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 EDN1P05305 212 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 NCLP19338 710 aaKnown RBP14.49□□□□□ -0.09
LIG1-212ENST00000596549 COASYQ13057 564 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 PTGDRQ13258 359 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 TFDP1Q14186 410 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 IL17AQ16552 155 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 HAUS3Q68CZ6 603 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 CDCA2Q69YH5 1023 aaPredicted RBP14.49□□□□□ -0.09
LIG1-212ENST00000596549 PDE12Q6L8Q7 609 aaKnown RBP14.49□□□□□ -0.09
LIG1-212ENST00000596549 CDR2LQ86X02 465 aaPredicted RBP14.49□□□□□ -0.09
LIG1-212ENST00000596549 ZNF280BQ86YH2 543 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 GJD3Q8N144 294 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 IGSF22Q8N9C0 903 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 ERMNQ8TAM6 284 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 MICAL1Q8TDZ2 1067 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 PGBD4Q96DM1 585 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 VN1R3Q9BXE9 311 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 ZBP1Q9H171 429 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 TLE6Q9H808 572 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 UPF2Q9HAU5 1272 aaKnown RBP14.49□□□□□ -0.09
LIG1-212ENST00000596549 C11orf16Q9NQ32 467 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.49□□□□□ -0.09
LIG1-212ENST00000596549 HES2Q9Y543 173 aa14.49□□□□□ -0.09
LIG1-212ENST00000596549 CNTNAP2Q9UHC6 1331 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 C19orf67A6NJJ6 358 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 TTLL13PA6NNM8 815 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 GALTP07902 379 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 AXLP30530 894 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 MLH1P40692 756 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 SLC11A1P49279 550 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 PCBP1Q15365 356 aaKnown RBP eCLIP14.48□□□□□ -0.09
LIG1-212ENST00000596549 NOTUMQ6P988 496 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 MCPH1Q8NEM0 835 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 CCDC51Q96ER9 411 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 NACC1Q96RE7 527 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 CDCA3Q99618 268 aaPredicted RBP14.48□□□□□ -0.09
LIG1-212ENST00000596549 GBP3Q9H0R5 595 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 CSRNP2Q9H175 543 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 RNF39Q9H2S5 420 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 NXF3Q9H4D5 531 aaKnown RBP14.48□□□□□ -0.09
LIG1-212ENST00000596549 PRKAG3Q9UGI9 489 aa14.48□□□□□ -0.09
LIG1-212ENST00000596549 VWA8A3KMH1 1905 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 ARHGEF35A5YM69 484 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 LRRIQ4A6NIV6 560 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 INPPL1O15357 1258 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 MUTP22033 750 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 SSTR3P32745 418 aaPredicted RBP14.47□□□□□ -0.09
LIG1-212ENST00000596549 CCT6AP40227 531 aaKnown RBP14.47□□□□□ -0.09
LIG1-212ENST00000596549 ALDH7A1P49419 539 aaKnown RBP14.47□□□□□ -0.09
LIG1-212ENST00000596549 SMC1AQ14683 1233 aaKnown RBP14.47□□□□□ -0.09
LIG1-212ENST00000596549 PADI6Q6TGC4 694 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 TMC7Q7Z402 723 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 ADHFE1Q8IWW8 467 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 SNX29Q8TEQ0 813 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 TMEM169Q96HH4 297 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 IGSF21Q96ID5 467 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 NGRNQ9NPE2 291 aaKnown RBP14.47□□□□□ -0.09
LIG1-212ENST00000596549 MARCH5Q9NX47 278 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 LRWD1Q9UFC0 647 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 PUF60Q9UHX1 559 aaKnown RBP14.47□□□□□ -0.09
LIG1-212ENST00000596549 FAM50BQ9Y247 325 aa14.47□□□□□ -0.09
LIG1-212ENST00000596549 C2orf71A6NGG8 1288 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 POMCP01189 267 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 ITGA4P13612 1032 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 CYP11B2P19099 503 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 PRPHP41219 470 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 KRT17Q04695 432 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 RNASELQ05823 741 aaKnown RBP14.46□□□□□ -0.09
LIG1-212ENST00000596549 LLGL2Q6P1M3 1020 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 TMEM184AQ6ZMB5 413 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms