RNA–Protein interactions for RNA: ENST00000596271.1

SAMD4B-204, Transcript of sterile alpha motif domain containing 4B, humanhuman

Gene SAMD4B, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-204ENST00000596271 ELMSAN1Q6PJG2 1045 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 RHPN2Q8IUC4 686 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 CCDC83Q8IWF9 413 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 ZDHHC14Q8IZN3 488 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 VPS52Q8N1B4 723 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 TMEM87AQ8NBN3 555 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 PSPC1Q8WXF1 523 aaKnown RBP13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 ZBP1Q9H171 429 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 ZSWIM4Q9H7M6 989 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 AGPAT5Q9NUQ2 364 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 TBC1D13Q9NVG8 400 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 VAV3Q9UKW4 847 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 PCDHGC5Q9Y5F6 944 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 COL4A3BPQ9Y5P4 624 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 C5orf42Q9H799 3197 aa13.17□□□□□ -0.3
SAMD4B-204ENST00000596271 PLXNA4Q9HCM2 1894 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 RIF1Q5UIP0 2472 aaKnown RBP13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 OFD1O75665 1012 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 IBSPP21815 317 aaPredicted RBP13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 DRP2Q13474 957 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 INF2Q27J81 1249 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 LETM2Q2VYF4 491 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 ALYREFQ86V81 257 aaKnown RBP13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 RNF169Q8NCN4 708 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 ASIC4Q96FT7 647 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 LARP6Q9BRS8 491 aaKnown RBP13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 NFKBIZQ9BYH8 718 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 BRMS1Q9HCU9 246 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 HCSTQ9UBK5 93 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 SORCS3Q9UPU3 1222 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 PIN4Q9Y237 131 aaKnown RBP13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 PCDHB2Q9Y5E7 798 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 ZMYM2Q9UBW7 1377 aa13.16□□□□□ -0.3
SAMD4B-204ENST00000596271 CSPG5O95196 566 aa13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 MTMR3Q13615 1198 aa13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 C15orf39Q6ZRI6 1047 aa13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 NECAB1Q8N987 351 aa13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 CMASQ8NFW8 434 aaPredicted RBP13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 HDAC7Q8WUI4 952 aa13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 PRPF31Q8WWY3 499 aaKnown RBP13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 CEP170P1Q96L14 293 aa13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 EMILIN2Q9BXX0 1053 aa13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 NRDE2Q9H7Z3 1164 aa13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 ORC3Q9UBD5 711 aaPredicted RBP13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 RBM19Q9Y4C8 960 aaKnown RBP13.15□□□□□ -0.3
SAMD4B-204ENST00000596271 MYO10Q9HD67 2058 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 EML1O00423 815 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 MARCH6O60337 910 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 ZC3H11AO75152 810 aaKnown RBP eCLIP13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 PAPLNO95428 1278 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 NCLP19338 710 aaKnown RBP13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 AVPR2P30518 371 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 HOXA11P31270 313 aaPredicted RBP13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 YWHABP31946 246 aaKnown RBP13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 LAMTOR4Q0VGL1 99 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 TFDP1Q14186 410 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 SAFBQ15424 915 aaKnown RBP eCLIP13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 FERMT3Q86UX7 667 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 HACE1Q8IYU2 909 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 NSUN7Q8NE18 718 aaKnown RBP13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 HAS1Q92839 578 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 NLRP4Q96MN2 994 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 ANKEF1Q9NU02 776 aa13.14□□□□□ -0.31
SAMD4B-204ENST00000596271 SLC37A4O43826 429 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 CCNT1O60563 726 aaKnown RBP13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 LILRB3O75022 631 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 NR1I2O75469 434 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 DGAT1O75907 488 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 PTENP60484 403 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 RBM10P98175 930 aaKnown RBP13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 SPIRE1Q08AE8 756 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 AGMOQ6ZNB7 445 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 OTOP3Q7RTS5 596 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 GPR149Q86SP6 731 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 ACSF2Q96CM8 615 aaPredicted RBP13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 FAM193BQ96PV7 902 aaPredicted RBP13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 HSD17B14Q9BPX1 270 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 LXNQ9BS40 222 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 SFXN1Q9H9B4 322 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 RSAD1Q9HA92 442 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 MRPL17Q9NRX2 175 aaKnown RBP13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 FAN1Q9Y2M0 1017 aa13.13□□□□□ -0.31
SAMD4B-204ENST00000596271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.12□□□□□ -0.31
SAMD4B-204ENST00000596271 CSDE1O75534 798 aaKnown RBP13.12□□□□□ -0.31
SAMD4B-204ENST00000596271 LARGE1O95461 756 aa13.12□□□□□ -0.31
SAMD4B-204ENST00000596271 FGFR4P22455 802 aa13.12□□□□□ -0.31
SAMD4B-204ENST00000596271 PBX3P40426 434 aa13.12□□□□□ -0.31
SAMD4B-204ENST00000596271 NPEPPSP55786 919 aa13.12□□□□□ -0.31
SAMD4B-204ENST00000596271 EMC2Q15006 297 aa13.12□□□□□ -0.31
SAMD4B-204ENST00000596271 PTPN14Q15678 1187 aa13.12□□□□□ -0.31
SAMD4B-204ENST00000596271 LLGL2Q6P1M3 1020 aa13.12□□□□□ -0.31
SAMD4B-204ENST00000596271 NOTUMQ6P988 496 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms