RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 FZD8Q9H461 694 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 PRDM12Q9H4Q4 367 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 KMT5AQ9NQR1 393 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 FAM105AQ9NUU6 356 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 TMEM161AQ9NX61 479 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 DACT1Q9NYF0 836 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 ATP6V1DQ9Y5K8 247 aa15.22■□□□□ 0.03
SHKBP1-207ENST00000595631 CITO14578 2027 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 A0A0U1RQF3 1178 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 MYMKA6NI61 221 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 PRKCBP05771 671 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 PLS3P13797 630 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 DMP1Q13316 513 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 BTG3Q14201 252 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 E2F4Q16254 413 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 CLLU1OSQ5K130 101 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 TAS1R3Q7RTX0 852 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 MYLIPQ8WY64 445 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 ARNTL2Q8WYA1 636 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 CDX2Q99626 313 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 C2orf40Q9H1Z8 148 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 ZHX3Q9H4I2 956 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 ELAC1Q9H777 363 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 PRMT7Q9NVM4 692 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 KCND2Q9NZV8 630 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 PCDHB2Q9Y5E7 798 aa15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 MRPL42Q9Y6G3 142 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-207ENST00000595631 PDCD11Q14690 1871 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 CNTNAP2Q9UHC6 1331 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 CHD9Q3L8U1 2897 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 TBKBP1A7MCY6 615 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 FAM13AO94988 1023 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 LINC00271P0C7V0 271 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 MAPK6Q16659 721 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 FAM187BQ17R55 369 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 NT5DC1Q5TFE4 455 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 NOTUMQ6P988 496 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 SV2BQ7L1I2 683 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 FIBCD1Q8N539 461 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 ARHGAP28Q9P2N2 729 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 ODF2LQ9ULJ1 636 aa15.2■□□□□ 0.02
SHKBP1-207ENST00000595631 PHLPP2Q6ZVD8 1323 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 A0A1B0GVL5 298 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 POLR2DO15514 142 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 NPTXRO95502 500 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 AXLP30530 894 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 ERVK-21P61565 698 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 PRPF4BQ13523 1007 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 PCBP1Q15365 356 aaKnown RBP eCLIP15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 TMEM132AQ24JP5 1023 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 EEF1DP3Q658K8 133 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 FAM43BQ6ZT52 329 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 CMTR2Q8IYT2 770 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 MYCT1Q8N699 235 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 SMG8Q8ND04 991 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 HELQQ8TDG4 1101 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 DDX12PQ92771 950 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 CASD1Q96PB1 797 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 TGS1Q96RS0 853 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 TRAIPQ9BWF2 469 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 APOL6Q9BWW8 343 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 SCAND2PQ9GZW5 306 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 PDZD7Q9H5P4 517 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 TSHZ2Q9NRE2 1034 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 FAM13BQ9NYF5 915 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 HES2Q9Y543 173 aa15.19■□□□□ 0.02
SHKBP1-207ENST00000595631 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 A0A1B0GUA9 196 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 K7ERI5 159 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 ACKR2O00590 384 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 TBCAO75347 108 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 EOMESO95936 686 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 MAPTP10636 758 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 PFKFB1P16118 471 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 RAB27AP51159 221 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 ZNF131P52739 623 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 EFNA5P52803 228 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 ADALQ6DHV7 355 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 AGMOQ6ZNB7 445 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 SFR1Q86XK3 245 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 TMEM161BQ8NDZ6 487 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 GDPD5Q8WTR4 605 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 SPIRE2Q8WWL2 714 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 DNAJC19Q96DA6 116 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 PRIMPOLQ96LW4 560 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 RNF39Q9H2S5 420 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 NXF3Q9H4D5 531 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 C17orf75Q9HAS0 396 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 PARVGQ9HBI0 331 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 CIZ1Q9ULV3 898 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 IPPQ9Y573 584 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 ANK1P16157 1881 aa15.18■□□□□ 0.02
SHKBP1-207ENST00000595631 CDH23Q9H251 3354 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 ZNF623O75123 536 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 CASP1P29466 404 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 NMT1P30419 496 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 CTNNB1P35222 781 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 NCKAP1LP55160 1127 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 NCBP1Q09161 790 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms