RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 RBM28Q9NW13 759 aaKnown RBP14.38□□□□□ -0.11
SCAF1-202ENST00000595242 TFIP11Q9UBB9 837 aaKnown RBP14.38□□□□□ -0.11
SCAF1-202ENST00000595242 MAFGO15525 162 aa14.37□□□□□ -0.11
SCAF1-202ENST00000595242 N4BP1O75113 896 aaKnown RBP14.37□□□□□ -0.11
SCAF1-202ENST00000595242 DEXIO95424 95 aa14.37□□□□□ -0.11
SCAF1-202ENST00000595242 CTSAP10619 480 aa14.37□□□□□ -0.11
SCAF1-202ENST00000595242 SRFP11831 508 aa14.37□□□□□ -0.11
SCAF1-202ENST00000595242 NASPP49321 788 aaPredicted RBP14.37□□□□□ -0.11
SCAF1-202ENST00000595242 ACTR2P61160 394 aa14.37□□□□□ -0.11
SCAF1-202ENST00000595242 LMNB2Q03252 620 aa14.37□□□□□ -0.11
SCAF1-202ENST00000595242 TROAPQ12815 778 aa14.37□□□□□ -0.11
SCAF1-202ENST00000595242 COL9A2Q14055 689 aaPredicted RBP14.37□□□□□ -0.11
SCAF1-202ENST00000595242 PPFIBP1Q86W92 1011 aa14.37□□□□□ -0.11
SCAF1-202ENST00000595242 GPR152Q8TDT2 470 aa14.37□□□□□ -0.11
SCAF1-202ENST00000595242 MAP3K14Q99558 947 aa14.37□□□□□ -0.11
SCAF1-202ENST00000595242 DDX19AQ9NUU7 478 aaKnown RBP14.37□□□□□ -0.11
SCAF1-202ENST00000595242 UBIAD1Q9Y5Z9 338 aa14.37□□□□□ -0.11
SCAF1-202ENST00000595242 CNOT1A5YKK6 2376 aaKnown RBP14.36□□□□□ -0.11
SCAF1-202ENST00000595242 GLULP15104 373 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 ZSCAN20P17040 1043 aaPredicted RBP14.36□□□□□ -0.11
SCAF1-202ENST00000595242 U2AF2P26368 475 aaKnown RBP eCLIP14.36□□□□□ -0.11
SCAF1-202ENST00000595242 GBP2P32456 591 aaPredicted RBP14.36□□□□□ -0.11
SCAF1-202ENST00000595242 SLC26A2P50443 739 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 POLGP54098 1239 aaPredicted RBP14.36□□□□□ -0.11
SCAF1-202ENST00000595242 GUCY1B3Q02153 619 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 FUT2Q10981 343 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 ZNF528Q3MIS6 628 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 C15orf39Q6ZRI6 1047 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 RBM43Q6ZSC3 357 aaKnown RBP14.36□□□□□ -0.11
SCAF1-202ENST00000595242 DDX53Q86TM3 631 aaKnown RBP14.36□□□□□ -0.11
SCAF1-202ENST00000595242 TMEM173Q86WV6 379 aaPredicted RBP14.36□□□□□ -0.11
SCAF1-202ENST00000595242 ECHDC2Q86YB7 292 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 TRIM22Q8IYM9 498 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 HELQQ8TDG4 1101 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 SECISBP2LQ93073 1101 aaKnown RBP14.36□□□□□ -0.11
SCAF1-202ENST00000595242 PHKBQ93100 1093 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 BORCS6Q96GS4 357 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 FUCA2Q9BTY2 467 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 TSPY26PQ9H489 355 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 JADE2Q9NQC1 790 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 ARHGEF3Q9NR81 526 aa14.36□□□□□ -0.11
SCAF1-202ENST00000595242 SPTLC1O15269 473 aa14.35□□□□□ -0.11
SCAF1-202ENST00000595242 HBP1O60381 514 aa14.35□□□□□ -0.11
SCAF1-202ENST00000595242 FOSBP53539 338 aa14.35□□□□□ -0.11
SCAF1-202ENST00000595242 PTPN14Q15678 1187 aa14.35□□□□□ -0.11
SCAF1-202ENST00000595242 CATIPQ7Z7H3 387 aa14.35□□□□□ -0.11
SCAF1-202ENST00000595242 PJA1Q8NG27 643 aa14.35□□□□□ -0.11
SCAF1-202ENST00000595242 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
SCAF1-202ENST00000595242 SLC26A6Q9BXS9 759 aa14.35□□□□□ -0.11
SCAF1-202ENST00000595242 MRPL9Q9BYD2 267 aaKnown RBP14.35□□□□□ -0.11
SCAF1-202ENST00000595242 PANK2Q9BZ23 570 aa14.35□□□□□ -0.11
SCAF1-202ENST00000595242 FOXQ1Q9C009 403 aa14.35□□□□□ -0.11
SCAF1-202ENST00000595242 RBSNQ9H1K0 784 aa14.35□□□□□ -0.11
SCAF1-202ENST00000595242 ASPMQ8IZT6 3477 aa14.35□□□□□ -0.11
SCAF1-202ENST00000595242 GOLGA6L4A6NEF3 574 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 PRPF3O43395 683 aaKnown RBP14.34□□□□□ -0.11
SCAF1-202ENST00000595242 ZC3H11AO75152 810 aaKnown RBP eCLIP14.34□□□□□ -0.11
SCAF1-202ENST00000595242 LRRN2O75325 713 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 GPR32O75388 356 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 VTNP04004 478 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 LIG1P18858 919 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 CLCN4P51793 760 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 TRIM29Q14134 588 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 DCLRE1AQ6PJP8 1040 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 TMTC3Q6ZXV5 915 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 LINC00301Q8NCQ3 95 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 ATRIPQ8WXE1 791 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 NXPE3Q969Y0 559 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 IGSF21Q96ID5 467 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 AIFM3Q96NN9 605 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 CLSTN2Q9H4D0 955 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 KCNH7Q9NS40 1196 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 EPS15L1Q9UBC2 864 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 USP18Q9UMW8 372 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 COL1A2P08123 1366 aa14.34□□□□□ -0.11
SCAF1-202ENST00000595242 A0A1W2PQ27 194 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 A0A1W2PQ64 194 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 A0A1W2PQD8 194 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 ZBTB42B2RXF5 422 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 KLRC2P26717 231 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 ZNF484Q5JVG2 852 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 ZNF598Q86UK7 904 aaKnown RBP14.33□□□□□ -0.12
SCAF1-202ENST00000595242 METTL13Q8N6R0 699 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 STAMQ92783 540 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 KLHL5Q96PQ7 755 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 PPP1R9BQ96SB3 815 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 EMILIN2Q9BXX0 1053 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 NUP62CLQ9H1M0 184 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 PSTPIP2Q9H939 334 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 WDR6Q9NNW5 1121 aaKnown RBP14.33□□□□□ -0.12
SCAF1-202ENST00000595242 SPATA6Q9NWH7 488 aaPredicted RBP14.33□□□□□ -0.12
SCAF1-202ENST00000595242 FBXO4Q9UKT5 387 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 PCDHGA2Q9Y5H1 932 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 MORC2Q9Y6X9 1032 aaPredicted RBP14.33□□□□□ -0.12
SCAF1-202ENST00000595242 NFASCO94856 1347 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 CNTNAP5Q8WYK1 1306 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 COL4A3Q01955 1670 aa14.33□□□□□ -0.12
SCAF1-202ENST00000595242 FASNP49327 2511 aaKnown RBP14.33□□□□□ -0.12
SCAF1-202ENST00000595242 IGKV6D-21A0A0A0MT36 114 aa14.32□□□□□ -0.12
SCAF1-202ENST00000595242 A0A0U1RQF3 1178 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms