RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SLX4Q8IY92 1834 aa14.28□□□□□ -0.12
VRK3-209ENST00000594948 RTN2O75298 545 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 SLITRK3O94933 977 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 SERPINB2P05120 415 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 GZMAP12544 262 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 KRT13P13646 458 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 NF2P35240 595 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 RPL21P46778 160 aaKnown RBP14.27□□□□□ -0.12
VRK3-209ENST00000594948 PEX5P50542 639 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 ELF3P78545 371 aaPredicted RBP14.27□□□□□ -0.12
VRK3-209ENST00000594948 ZNF211Q13398 564 aaPredicted RBP14.27□□□□□ -0.12
VRK3-209ENST00000594948 ALCAMQ13740 583 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 SLC29A2Q14542 456 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 CERKLQ49MI3 558 aaPredicted RBP14.27□□□□□ -0.12
VRK3-209ENST00000594948 TATDN1Q6P1N9 297 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 TMEM179Q6ZVK1 233 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 TRMT10CQ7L0Y3 403 aaKnown RBP14.27□□□□□ -0.12
VRK3-209ENST00000594948 OTOP1Q7RTM1 612 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 FAM178BQ8IXR5 827 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 C12orf56Q8IXR9 622 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 SLCO2A1Q92959 643 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 MRIQ9BWK5 157 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 ATP6V0A4Q9HBG4 840 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 TAS2R14Q9NYV8 317 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 MTUS1Q9ULD2 1270 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 AFF2P51816 1311 aa14.27□□□□□ -0.12
VRK3-209ENST00000594948 LOC102724159A0A0B4J2E5 919 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 PMM2O15305 246 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 RIPK2O43353 540 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 KIF1CO43896 1103 aaKnown RBP14.27□□□□□ -0.13
VRK3-209ENST00000594948 PSMD10O75832 226 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 MAPTP10636 758 aaKnown RBP14.27□□□□□ -0.13
VRK3-209ENST00000594948 ELF1P32519 619 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 ZNF76P36508 570 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 PRELPP51888 382 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 CETN1Q12798 172 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 PWP2Q15269 919 aaKnown RBP14.27□□□□□ -0.13
VRK3-209ENST00000594948 ZNF568Q3ZCX4 644 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 ZC2HC1CQ53FD0 456 aaPredicted RBP14.27□□□□□ -0.13
VRK3-209ENST00000594948 PHLDB3Q6NSJ2 640 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 APOBEC3HQ6NTF7 200 aaKnown RBP14.27□□□□□ -0.13
VRK3-209ENST00000594948 LRRC34Q8IZ02 419 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 CCHCR1Q8TD31 782 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 SLC5A5Q92911 643 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 CD101Q93033 1021 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 NACC1Q96RE7 527 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 RGL1Q9NZL6 768 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 ZNF536O15090 1300 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 PASKQ96RG2 1323 aa14.27□□□□□ -0.13
VRK3-209ENST00000594948 FOXN3O00409 490 aaPredicted RBP14.26□□□□□ -0.13
VRK3-209ENST00000594948 OPLAHO14841 1288 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 BACH1O14867 736 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 MAPK13O15264 365 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 OAS1P00973 400 aaKnown RBP14.26□□□□□ -0.13
VRK3-209ENST00000594948 ATP5DP30049 168 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 MCCD1P59942 119 aaPredicted RBP14.26□□□□□ -0.13
VRK3-209ENST00000594948 CCDC137Q6PK04 289 aaKnown RBP14.26□□□□□ -0.13
VRK3-209ENST00000594948 FAM196AQ6ZSG2 479 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 INTS8Q75QN2 995 aaKnown RBP14.26□□□□□ -0.13
VRK3-209ENST00000594948 TRPM8Q7Z2W7 1104 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 SIAH1Q8IUQ4 282 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 CCDC63Q8NA47 563 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 C18orf8Q96DM3 657 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 DYDC2Q96IM9 177 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 BCAS3Q9H6U6 928 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 HOMER3Q9NSC5 361 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 TMOD4Q9NZQ9 345 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 CTTNBP2NLQ9P2B4 639 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 PI4KBQ9UBF8 816 aa14.26□□□□□ -0.13
VRK3-209ENST00000594948 F5H6K3 240 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 RASGRF2O14827 1237 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 PPEF1O14829 653 aaPredicted RBP14.25□□□□□ -0.13
VRK3-209ENST00000594948 ATP6V1G2O95670 118 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 FTLP02792 175 aaPredicted RBP14.25□□□□□ -0.13
VRK3-209ENST00000594948 TRIM49P0CI25 452 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 TRIM49CP0CI26 452 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 POLD1P28340 1107 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 COILP38432 576 aaPredicted RBP14.25□□□□□ -0.13
VRK3-209ENST00000594948 PDE6CP51160 858 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 ICA1Q05084 483 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 AUHQ13825 339 aaKnown RBP14.25□□□□□ -0.13
VRK3-209ENST00000594948 COG2Q14746 738 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 CNGA2Q16280 664 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 ARHGAP44Q17R89 818 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 EPC2Q52LR7 807 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 LRCH2Q5VUJ6 765 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 TTC27Q6P3X3 843 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 PALB2Q86YC2 1186 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 SLC13A5Q86YT5 568 aaPredicted RBP14.25□□□□□ -0.13
VRK3-209ENST00000594948 ZDHHC15Q96MV8 337 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 PLCD4Q9BRC7 762 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 IDI2Q9BXS1 227 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 WDR11Q9BZH6 1224 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 SEMA4AQ9H3S1 761 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 KCNQ5Q9NR82 932 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 SEPT11Q9NVA2 429 aaKnown RBP14.25□□□□□ -0.13
VRK3-209ENST00000594948 WHRNQ9P202 907 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 TLDC2A0PJX2 215 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 SFI1A8K8P3 1242 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 UBAP1LF5GYI3 381 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms