RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 LOXHD1Q8IVV2 1947 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 SPDYE5A6NIY4 337 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 ENO4A6NNW6 628 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 GCNT3O95395 438 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 ATP6V1G2O95670 118 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 GAP43P17677 238 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 EPHB4P54760 987 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 HERVK_113P62684 666 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 KRT83P78385 493 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 NNTQ13423 1086 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 IQCEQ6IPM2 695 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 CCDC70Q6NSX1 233 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 ZC3H3Q8IXZ2 948 aaKnown RBP16.65■□□□□ 0.26
PNKP-204ENST00000594661 MMGT1Q8N4V1 131 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 MYCT1Q8N699 235 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 GPRASP2Q96D09 838 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 CEP63Q96MT8 703 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 OSBPL9Q96SU4 736 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 NOD2Q9HC29 1040 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 HDAC6Q9UBN7 1215 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 TRIM10Q9UDY6 481 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 C15orf41Q9Y2V0 281 aa16.65■□□□□ 0.26
PNKP-204ENST00000594661 ARHGEF35A5YM69 484 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 EPHB6O15197 1021 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 NMT1P30419 496 aaKnown RBP16.64■□□□□ 0.25
PNKP-204ENST00000594661 MDH1P40925 334 aaKnown RBP16.64■□□□□ 0.25
PNKP-204ENST00000594661 QARSP47897 775 aaKnown RBP16.64■□□□□ 0.25
PNKP-204ENST00000594661 GUCY1A3Q02108 690 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 KCNA1Q09470 495 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 KNOP1Q1ED39 458 aaKnown RBP16.64■□□□□ 0.25
PNKP-204ENST00000594661 BMT2Q1RMZ1 405 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 MFN1Q8IWA4 741 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 CCDC170Q8IYT3 715 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 TSEN2Q8NCE0 465 aaKnown RBP16.64■□□□□ 0.25
PNKP-204ENST00000594661 PROCA1Q8NCQ7 364 aaPredicted RBP16.64■□□□□ 0.25
PNKP-204ENST00000594661 TRIM58Q8NG06 486 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 CYFIP2Q96F07 1278 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 TAF1DQ9H5J8 278 aaPredicted RBP16.64■□□□□ 0.25
PNKP-204ENST00000594661 PARVGQ9HBI0 331 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 KIAA1217Q5T5P2 1943 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 ASTN1O14525 1302 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 ATP1A1P05023 1023 aaKnown RBP16.64■□□□□ 0.25
PNKP-204ENST00000594661 SCTRP47872 440 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 ZNF131P52739 623 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 EDRF1Q3B7T1 1238 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 PPP4R3CPQ6ZMV5 832 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 CHST13Q8NET6 341 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 FIZ1Q96SL8 496 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 HAUS4Q9H6D7 363 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 KCND2Q9NZV8 630 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 TRAF3IP3Q9Y228 551 aa16.64■□□□□ 0.25
PNKP-204ENST00000594661 TMEM150BA6NC51 233 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 GNA14O95837 355 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 TNFRSF8P28908 595 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 CDK17Q00537 523 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 KRT76Q01546 638 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 ITIH3Q06033 890 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 ADAM9Q13443 819 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 SPRED3Q2MJR0 410 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 CCDC122Q5T0U0 273 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 PADI6Q6TGC4 694 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 NLRX1Q86UT6 975 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 RPUSD2Q8IZ73 545 aaKnown RBP16.63■□□□□ 0.25
PNKP-204ENST00000594661 SH2D3CQ8N5H7 860 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 CCDC155Q8N6L0 562 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 TFR2Q9UP52 801 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 WDR64B1ANS9 1081 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 CXCL11O14625 94 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 BUB1BO60566 1050 aaPredicted RBP16.63■□□□□ 0.25
PNKP-204ENST00000594661 HIP1RO75146 1068 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 LYPLA2O95372 231 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 GHRP10912 638 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 KCNA2P16389 499 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 NR2F2P24468 414 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 SEC24CP53992 1094 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 ELF3P78545 371 aaPredicted RBP16.63■□□□□ 0.25
PNKP-204ENST00000594661 CNTN2Q02246 1040 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 MAPK7Q13164 816 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 RIPK1Q13546 671 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 ZC2HC1CQ53FD0 456 aaPredicted RBP16.63■□□□□ 0.25
PNKP-204ENST00000594661 CWF19L1Q69YN2 538 aaKnown RBP16.63■□□□□ 0.25
PNKP-204ENST00000594661 ZNF572Q7Z3I7 529 aaPredicted RBP16.63■□□□□ 0.25
PNKP-204ENST00000594661 DAW1Q8N136 415 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 CCHCR1Q8TD31 782 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 SMCR8Q8TEV9 937 aaPredicted RBP16.63■□□□□ 0.25
PNKP-204ENST00000594661 SH2D3AQ9BRG2 576 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 IKZF4Q9H2S9 585 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 PLAGL2Q9UPG8 496 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 KCNH4Q9UQ05 1017 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 TELO2Q9Y4R8 837 aa16.63■□□□□ 0.25
PNKP-204ENST00000594661 ZMYM2Q9UBW7 1377 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 DOCK5Q9H7D0 1870 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 SCN4AP35499 1836 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 NR1D1P20393 614 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 RARRES1P49788 294 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 JAK3P52333 1124 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 MARSP56192 900 aaKnown RBP16.62■□□□□ 0.25
PNKP-204ENST00000594661 FSTL1Q12841 308 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 PPIL2Q13356 520 aa16.62■□□□□ 0.25
PNKP-204ENST00000594661 THEMIS2Q5TEJ8 643 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms