RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ZNF668Q96K58 619 aaPredicted RBP16.6■□□□□ 0.25
VRK3-207ENST00000594092 NLRP4Q96MN2 994 aa16.6■□□□□ 0.25
VRK3-207ENST00000594092 BEGAINQ9BUH8 593 aa16.6■□□□□ 0.25
VRK3-207ENST00000594092 CCDC113Q9H0I3 377 aa16.6■□□□□ 0.25
VRK3-207ENST00000594092 C2orf40Q9H1Z8 148 aa16.6■□□□□ 0.25
VRK3-207ENST00000594092 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.6■□□□□ 0.25
VRK3-207ENST00000594092 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.6■□□□□ 0.25
VRK3-207ENST00000594092 MBLAC1A4D2B0 266 aaPredicted RBP16.59■□□□□ 0.25
VRK3-207ENST00000594092 PIGRP01833 764 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 EDN1P05305 212 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 SKILP12757 684 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 CCZ1BP86790 482 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 CCZ1P86791 482 aaPredicted RBP16.59■□□□□ 0.25
VRK3-207ENST00000594092 FKBP15Q5T1M5 1219 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 NFRKBQ6P4R8 1299 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 ZBTB8OSQ8IWT0 167 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 XXYLT1Q8NBI6 393 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 SLAIN1Q8ND83 568 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 CCDC112Q8NEF3 446 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 ZSWIM2Q8NEG5 633 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 KIAA1524Q8TCG1 905 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 ERGIC2Q96RQ1 377 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 MTG1Q9BT17 334 aaPredicted RBP16.59■□□□□ 0.25
VRK3-207ENST00000594092 AKT3Q9Y243 479 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 USP20Q9Y2K6 914 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 ZEB2O60315 1214 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 INHAP05111 366 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 TPM1P09493 284 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 CLCN1P35523 988 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 LIG4P49917 911 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 PTENP60484 403 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 ADAM17P78536 824 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 TRIM14Q14142 442 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 HIC1Q14526 733 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 KIAA0319LQ8IZA0 1049 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 KLHDC9Q8NEP7 349 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 DDX20Q9UHI6 824 aaKnown RBP16.59■□□□□ 0.25
VRK3-207ENST00000594092 TRIM17Q9Y577 477 aa16.59■□□□□ 0.25
VRK3-207ENST00000594092 MSCO60682 206 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 VTNP04004 478 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 GARTP22102 1010 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 GRK4P32298 578 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 PPP2R3AQ06190 1150 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 POU5F1BQ06416 359 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 KCNH2Q12809 1159 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 SYCP1Q15431 976 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 CXCL17Q6UXB2 119 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 RDH13Q8NBN7 331 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 POMGNT1Q8WZA1 660 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 SLC35C1Q96A29 364 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 MAP7D2Q96T17 732 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 TARS2Q9BW92 718 aaKnown RBP16.58■□□□□ 0.24
VRK3-207ENST00000594092 NFKBIZQ9BYH8 718 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 IFT122Q9HBG6 1241 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 PTCH2Q9Y6C5 1203 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 STYXL1Q9Y6J8 313 aa16.58■□□□□ 0.24
VRK3-207ENST00000594092 AKR1B15C9JRZ8 316 aaPredicted RBP16.57■□□□□ 0.24
VRK3-207ENST00000594092 PRKCBP05771 671 aa16.57■□□□□ 0.24
VRK3-207ENST00000594092 CST5P28325 142 aaPredicted RBP16.57■□□□□ 0.24
VRK3-207ENST00000594092 HOXC8P31273 242 aa16.57■□□□□ 0.24
VRK3-207ENST00000594092 MAPK6Q16659 721 aa16.57■□□□□ 0.24
VRK3-207ENST00000594092 CCSAPQ6IQ19 270 aaPredicted RBP16.57■□□□□ 0.24
VRK3-207ENST00000594092 CCDC155Q8N6L0 562 aa16.57■□□□□ 0.24
VRK3-207ENST00000594092 MINDY3Q9H8M7 445 aa16.57■□□□□ 0.24
VRK3-207ENST00000594092 HDAC6Q9UBN7 1215 aa16.57■□□□□ 0.24
VRK3-207ENST00000594092 SCN10AQ9Y5Y9 1956 aa16.57■□□□□ 0.24
VRK3-207ENST00000594092 GOLGA8IPA6NC78 632 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 GOLGA8JA6NMD2 632 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 TTLL13PA6NNM8 815 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 MAPK13O15264 365 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 PHKA2P46019 1235 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 KLK7P49862 253 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 MBTD1Q05BQ5 628 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 RBL2Q08999 1139 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 GOLGA8FQ08AF8 430 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 GOLGA8DPQ0D2H9 430 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 DCAF17Q5H9S7 520 aaPredicted RBP16.56■□□□□ 0.24
VRK3-207ENST00000594092 TCERG1LQ5VWI1 586 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 RUFY4Q6ZNE9 571 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 IFNLR1Q8IU57 520 aaPredicted RBP16.56■□□□□ 0.24
VRK3-207ENST00000594092 C7orf31Q8N865 590 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 SAAL1Q96ER3 474 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 ZBTB45Q96K62 511 aaPredicted RBP16.56■□□□□ 0.24
VRK3-207ENST00000594092 FBXL18Q96ME1 805 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 PPP1R16BQ96T49 567 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 FZD8Q9H461 694 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 WBP1LQ9NX94 342 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 SIK3Q9Y2K2 1263 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 A0A087WZ62 844 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 SMIM35A0A1B0GVV1 85 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 C17orf102A2RUQ5 167 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 INO80B-WBP1J3KQ70 363 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 AFPP02771 609 aaKnown RBP16.56■□□□□ 0.24
VRK3-207ENST00000594092 GYPCP04921 128 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 ASGR1P07306 291 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 CYP2C9P11712 490 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 GPC3P51654 580 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 C1QTNF8P60827 252 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 ZNF200P98182 395 aaPredicted RBP16.56■□□□□ 0.24
VRK3-207ENST00000594092 KCNA10Q16322 511 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms