RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 NCLP19338 710 aaKnown RBP20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 NAMPTP43490 491 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 PLCB3Q01970 1234 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 NCBP1Q09161 790 aaKnown RBP20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 HYAL1Q12794 435 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 FAM187BQ17R55 369 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 NOMO2Q5JPE7 1267 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 GLB1LQ6UWU2 654 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 PPP4R3CPQ6ZMV5 832 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 RSPH1Q8WYR4 309 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 SYMPKQ92797 1274 aaKnown RBP20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 CCDC51Q96ER9 411 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 ZNF558Q96NG5 402 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 MRPL9Q9BYD2 267 aaKnown RBP20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 TBC1D13Q9NVG8 400 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 MTMR6Q9Y217 621 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 IPPQ9Y573 584 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 PCDHGC5Q9Y5F6 944 aa20.46■□□□□ 0.87
SHKBP1-202ENST00000593764 A0A1B0GUA9 196 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 TTLL13PA6NNM8 815 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 BMP15O95972 392 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 GTF2F1P35269 517 aaKnown RBP eCLIP20.45■□□□□ 0.861e-6■■■■■ 54.6
SHKBP1-202ENST00000593764 ERVFC1P60507 584 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 GRIN1Q05586 938 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 CTC1Q2NKJ3 1217 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 RINT1Q6NUQ1 792 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 FAM173BQ6P4H8 233 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 C1orf186Q6ZWK4 172 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 ADGRD2Q7Z7M1 963 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 DAW1Q8N136 415 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 KIFAP3Q92845 792 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 PABPC5Q96DU9 382 aaKnown RBP20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 AK8Q96MA6 479 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 RUSC1Q9BVN2 902 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 CCDC113Q9H0I3 377 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 RNF39Q9H2S5 420 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 NRDE2Q9H7Z3 1164 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 LZTS1Q9Y250 596 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 INPP5FQ9Y2H2 1132 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 HES2Q9Y543 173 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 CLIC4Q9Y696 253 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 NCOR1O75376 2440 aa20.45■□□□□ 0.86
SHKBP1-202ENST00000593764 KCNA5P22460 613 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 LTBRP36941 435 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 BCAR1P56945 870 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 PTPAQ15257 358 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 ZRSR1Q15695 479 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 TMEM119Q4V9L6 283 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 CDR2LQ86X02 465 aaPredicted RBP20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 ZBTB8OSQ8IWT0 167 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 SLC39A11Q8N1S5 342 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 KCTD17Q8N5Z5 321 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 CNNM3Q8NE01 707 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 MRPS27Q92552 414 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 PRIMPOLQ96LW4 560 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 PLIN2Q99541 437 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 KIFC3Q9BVG8 833 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 C2orf40Q9H1Z8 148 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 RSAD1Q9HA92 442 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 TLR9Q9NR96 1032 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 PRMT7Q9NVM4 692 aaPredicted RBP20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 SPG21Q9NZD8 308 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 TCF20Q9UGU0 1960 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 CNTNAP2Q9UHC6 1331 aa20.44■□□□□ 0.86
SHKBP1-202ENST00000593764 NT5C1B-RDH14C9J2C7 533 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 FSCN2O14926 492 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 B4GALT3O60512 393 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 EDN1P05305 212 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 PPM1AP35813 382 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 ALDH7A1P49419 539 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 MAPK7Q13164 816 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 PPP2R5AQ15172 486 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 LEXMQ3ZCV2 418 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 CABP7Q86V35 215 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 ZNF280BQ86YH2 543 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 ADAMTS19Q8TE59 1207 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 LRRC15Q8TF66 581 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 IFT74Q96LB3 600 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 NT5C3AQ9H0P0 336 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 USP20Q9Y2K6 914 aa20.43■□□□□ 0.86
SHKBP1-202ENST00000593764 INPPL1O15357 1258 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 NCK2O43639 380 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 STX6O43752 255 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 HIP1RO75146 1068 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 ZC3H11AO75152 810 aaKnown RBP eCLIP20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 DDHD2O94830 711 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 GALTP07902 379 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 ITGA4P13612 1032 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 SLC12A3P55017 1021 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 MAPK6Q16659 721 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 SLC27A1Q6PCB7 646 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 TMEM173Q86WV6 379 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 SYT2Q8N9I0 419 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 DEPTORQ8TB45 409 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 NXF3Q9H4D5 531 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 UBN1Q9NPG3 1134 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 CLDND1Q9NY35 253 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 DNAJB4Q9UDY4 337 aa20.42■□□□□ 0.86
SHKBP1-202ENST00000593764 ACKR2O00590 384 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms